Gene : Medtr7g068380 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Description:  vacuolar cation/proton exchanger 3
Genomic Order:  2787 Name:  ? Medtr7g068380
Secondary Identifier:  ? PAC:31081938
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g068380 0.5kb upstream 0.5kb upstream 4689 true chr7: 25012334-25017022 Medicago truncatula
Medtr7g068380 0.5kb upstream 0.5kb upstream 500 false chr7: 25016523-25017022 Medicago truncatula
Medtr7g068380 0.5kb downstream 0.5kb downstream 4689 true chr7: 25011834-25016522 Medicago truncatula
Medtr7g068380 0.5kb downstream 0.5kb downstream 500 false chr7: 25011834-25012333 Medicago truncatula
Medtr7g068380 1.0kb upstream 1.0kb upstream 5189 true chr7: 25012334-25017522 Medicago truncatula
Medtr7g068380 1.0kb upstream 1.0kb upstream 1000 false chr7: 25016523-25017522 Medicago truncatula
Medtr7g068380 1.0kb downstream 1.0kb downstream 5189 true chr7: 25011334-25016522 Medicago truncatula
Medtr7g068380 1.0kb downstream 1.0kb downstream 1000 false chr7: 25011334-25012333 Medicago truncatula
Medtr7g068380 2.0kb upstream 2.0kb upstream 6189 true chr7: 25012334-25018522 Medicago truncatula
Medtr7g068380 2.0kb upstream 2.0kb upstream 2000 false chr7: 25016523-25018522 Medicago truncatula
Medtr7g068380 2.0kb downstream 2.0kb downstream 6189 true chr7: 25010334-25016522 Medicago truncatula
Medtr7g068380 2.0kb downstream 2.0kb downstream 2000 false chr7: 25010334-25012333 Medicago truncatula
Medtr7g068380 5.0kb upstream 5.0kb upstream 9189 true chr7: 25012334-25021522 Medicago truncatula
Medtr7g068380 5.0kb upstream 5.0kb upstream 5000 false chr7: 25016523-25021522 Medicago truncatula
Medtr7g068380 5.0kb downstream 5.0kb downstream 9189 true chr7: 25007334-25016522 Medicago truncatula
Medtr7g068380 5.0kb downstream 5.0kb downstream 5000 false chr7: 25007334-25012333 Medicago truncatula
Medtr7g068380 10.0kb upstream 10.0kb upstream 14189 true chr7: 25012334-25026522 Medicago truncatula
Medtr7g068380 10.0kb upstream 10.0kb upstream 10000 false chr7: 25016523-25026522 Medicago truncatula
Medtr7g068380 10.0kb downstream 10.0kb downstream 14189 true chr7: 25002334-25016522 Medicago truncatula
Medtr7g068380 10.0kb downstream 10.0kb downstream 10000 false chr7: 25002334-25012333 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299639 5265 Fabidae View MSA
124065189 5270 Rosid View MSA
123739014 5271 Pentapetalae View MSA
122792056 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.33        
cufflinks 87.306     High High
cufflinks 29.175     High  
cufflinks 1.068        
cufflinks 46.079     High  
cufflinks 0.117     Low Low
cufflinks 2.134        
cufflinks 50.908     High  
cufflinks 1.063        

0 Strain