Gene : Medtr7g069210 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11048:SF18 - CHLOROPHYLL SYNTHASE, CHLOROPLASTIC Description:  bacteriochlorophyll synthase, putative
Genomic Order:  2837 Name:  ? Medtr7g069210
Secondary Identifier:  ? PAC:31080642
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5064 Medicago truncatula pathologic  
Mtruncatula PWY-5068 Medicago truncatula pathologic  
Mtruncatula PWY-5086 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g069210 0.5kb upstream 0.5kb upstream 6969 true chr7: 25506039-25513007 Medicago truncatula
Medtr7g069210 0.5kb upstream 0.5kb upstream 500 false chr7: 25506039-25506538 Medicago truncatula
Medtr7g069210 0.5kb downstream 0.5kb downstream 6969 true chr7: 25506539-25513507 Medicago truncatula
Medtr7g069210 0.5kb downstream 0.5kb downstream 500 false chr7: 25513008-25513507 Medicago truncatula
Medtr7g069210 1.0kb upstream 1.0kb upstream 7469 true chr7: 25505539-25513007 Medicago truncatula
Medtr7g069210 1.0kb upstream 1.0kb upstream 1000 false chr7: 25505539-25506538 Medicago truncatula
Medtr7g069210 1.0kb downstream 1.0kb downstream 7469 true chr7: 25506539-25514007 Medicago truncatula
Medtr7g069210 1.0kb downstream 1.0kb downstream 1000 false chr7: 25513008-25514007 Medicago truncatula
Medtr7g069210 2.0kb upstream 2.0kb upstream 8469 true chr7: 25504539-25513007 Medicago truncatula
Medtr7g069210 2.0kb upstream 2.0kb upstream 2000 false chr7: 25504539-25506538 Medicago truncatula
Medtr7g069210 2.0kb downstream 2.0kb downstream 8469 true chr7: 25506539-25515007 Medicago truncatula
Medtr7g069210 2.0kb downstream 2.0kb downstream 2000 false chr7: 25513008-25515007 Medicago truncatula
Medtr7g069210 5.0kb upstream 5.0kb upstream 11469 true chr7: 25501539-25513007 Medicago truncatula
Medtr7g069210 5.0kb upstream 5.0kb upstream 5000 false chr7: 25501539-25506538 Medicago truncatula
Medtr7g069210 5.0kb downstream 5.0kb downstream 11469 true chr7: 25506539-25518007 Medicago truncatula
Medtr7g069210 5.0kb downstream 5.0kb downstream 5000 false chr7: 25513008-25518007 Medicago truncatula
Medtr7g069210 10.0kb upstream 10.0kb upstream 16469 true chr7: 25496539-25513007 Medicago truncatula
Medtr7g069210 10.0kb upstream 10.0kb upstream 10000 false chr7: 25496539-25506538 Medicago truncatula
Medtr7g069210 10.0kb downstream 10.0kb downstream 16469 true chr7: 25506539-25523007 Medicago truncatula
Medtr7g069210 10.0kb downstream 10.0kb downstream 10000 false chr7: 25513008-25523007 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307052 5265 Fabidae View MSA
124067560 5270 Rosid View MSA
123737432 5271 Pentapetalae View MSA
122786780 5272 Eudicot View MSA
122042815 5273 Angiosperm View MSA
121346314 5274 Embryophyte View MSA
123424294 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.25       Low
cufflinks 3.37       High
cufflinks 1.521        
cufflinks 0.437        
cufflinks 4.649       High
cufflinks 0.141     Low Low
cufflinks 0.772        
cufflinks 2.492        
cufflinks 1.54        

0 Strain