Gene : Medtr7g071110 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11615//PTHR11615:SF144 - NITRATE, FROMATE, IRON DEHYDROGENASE Description:  CASP-like protein
Genomic Order:  2967 Name:  ? Medtr7g071110
Secondary Identifier:  ? PAC:31077426
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g071110 0.5kb upstream 0.5kb upstream 2489 true chr7: 26328233-26330721 Medicago truncatula
Medtr7g071110 0.5kb upstream 0.5kb upstream 500 false chr7: 26328233-26328732 Medicago truncatula
Medtr7g071110 0.5kb downstream 0.5kb downstream 2489 true chr7: 26328733-26331221 Medicago truncatula
Medtr7g071110 0.5kb downstream 0.5kb downstream 500 false chr7: 26330722-26331221 Medicago truncatula
Medtr7g071110 1.0kb upstream 1.0kb upstream 2989 true chr7: 26327733-26330721 Medicago truncatula
Medtr7g071110 1.0kb upstream 1.0kb upstream 1000 false chr7: 26327733-26328732 Medicago truncatula
Medtr7g071110 1.0kb downstream 1.0kb downstream 2989 true chr7: 26328733-26331721 Medicago truncatula
Medtr7g071110 1.0kb downstream 1.0kb downstream 1000 false chr7: 26330722-26331721 Medicago truncatula
Medtr7g071110 2.0kb upstream 2.0kb upstream 3989 true chr7: 26326733-26330721 Medicago truncatula
Medtr7g071110 2.0kb upstream 2.0kb upstream 2000 false chr7: 26326733-26328732 Medicago truncatula
Medtr7g071110 2.0kb downstream 2.0kb downstream 3989 true chr7: 26328733-26332721 Medicago truncatula
Medtr7g071110 2.0kb downstream 2.0kb downstream 2000 false chr7: 26330722-26332721 Medicago truncatula
Medtr7g071110 5.0kb upstream 5.0kb upstream 6989 true chr7: 26323733-26330721 Medicago truncatula
Medtr7g071110 5.0kb upstream 5.0kb upstream 5000 false chr7: 26323733-26328732 Medicago truncatula
Medtr7g071110 5.0kb downstream 5.0kb downstream 6989 true chr7: 26328733-26335721 Medicago truncatula
Medtr7g071110 5.0kb downstream 5.0kb downstream 5000 false chr7: 26330722-26335721 Medicago truncatula
Medtr7g071110 10.0kb upstream 10.0kb upstream 11989 true chr7: 26318733-26330721 Medicago truncatula
Medtr7g071110 10.0kb upstream 10.0kb upstream 10000 false chr7: 26318733-26328732 Medicago truncatula
Medtr7g071110 10.0kb downstream 10.0kb downstream 11989 true chr7: 26328733-26340721 Medicago truncatula
Medtr7g071110 10.0kb downstream 10.0kb downstream 10000 false chr7: 26330722-26340721 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310508 5265 Fabidae View MSA
124068306 5270 Rosid View MSA
123750880 5271 Pentapetalae View MSA
122792969 5272 Eudicot View MSA
122047644 5273 Angiosperm View MSA
121351377 5274 Embryophyte View MSA
123382143 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.928        
cufflinks 5.728        
cufflinks 15.128     High High
cufflinks 4.333        
cufflinks 3.642        
cufflinks 4.667        
cufflinks 4.759        
cufflinks 10.792     High High
cufflinks 2.677       Low

0 Strain