Gene : Medtr7g071990 M. truncatula Mt4.0v1
Defline:  (1 of 1) 6.3.2.4 - D-alanine--D-alanine ligase / D-alanylalanine synthetase Description:  D-alanine-D-alanine ligase
Genomic Order:  3004 Name:  ? Medtr7g071990
Secondary Identifier:  ? PAC:31079036
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g071990 0.5kb upstream 0.5kb upstream 11902 true chr7: 26724110-26736011 Medicago truncatula
Medtr7g071990 0.5kb upstream 0.5kb upstream 500 false chr7: 26735512-26736011 Medicago truncatula
Medtr7g071990 0.5kb downstream 0.5kb downstream 11902 true chr7: 26723610-26735511 Medicago truncatula
Medtr7g071990 0.5kb downstream 0.5kb downstream 500 false chr7: 26723610-26724109 Medicago truncatula
Medtr7g071990 1.0kb upstream 1.0kb upstream 12402 true chr7: 26724110-26736511 Medicago truncatula
Medtr7g071990 1.0kb upstream 1.0kb upstream 1000 false chr7: 26735512-26736511 Medicago truncatula
Medtr7g071990 1.0kb downstream 1.0kb downstream 12402 true chr7: 26723110-26735511 Medicago truncatula
Medtr7g071990 1.0kb downstream 1.0kb downstream 1000 false chr7: 26723110-26724109 Medicago truncatula
Medtr7g071990 2.0kb upstream 2.0kb upstream 13402 true chr7: 26724110-26737511 Medicago truncatula
Medtr7g071990 2.0kb upstream 2.0kb upstream 2000 false chr7: 26735512-26737511 Medicago truncatula
Medtr7g071990 2.0kb downstream 2.0kb downstream 13402 true chr7: 26722110-26735511 Medicago truncatula
Medtr7g071990 2.0kb downstream 2.0kb downstream 2000 false chr7: 26722110-26724109 Medicago truncatula
Medtr7g071990 5.0kb upstream 5.0kb upstream 16402 true chr7: 26724110-26740511 Medicago truncatula
Medtr7g071990 5.0kb upstream 5.0kb upstream 5000 false chr7: 26735512-26740511 Medicago truncatula
Medtr7g071990 5.0kb downstream 5.0kb downstream 16402 true chr7: 26719110-26735511 Medicago truncatula
Medtr7g071990 5.0kb downstream 5.0kb downstream 5000 false chr7: 26719110-26724109 Medicago truncatula
Medtr7g071990 10.0kb upstream 10.0kb upstream 21402 true chr7: 26724110-26745511 Medicago truncatula
Medtr7g071990 10.0kb upstream 10.0kb upstream 10000 false chr7: 26735512-26745511 Medicago truncatula
Medtr7g071990 10.0kb downstream 10.0kb downstream 21402 true chr7: 26714110-26735511 Medicago truncatula
Medtr7g071990 10.0kb downstream 10.0kb downstream 10000 false chr7: 26714110-26724109 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304418 5265 Fabidae View MSA
124074775 5270 Rosid View MSA
123747604 5271 Pentapetalae View MSA
122787402 5272 Eudicot View MSA
122042671 5273 Angiosperm View MSA
121345291 5274 Embryophyte View MSA
123380188 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.49       High
cufflinks 0.51        
cufflinks 1.256        
cufflinks 0.282       Low
cufflinks 1.028        
cufflinks 0.208       Low
cufflinks 1.314        
cufflinks 0.766        
cufflinks 2.869       High

0 Strain