Gene : Medtr7g073200 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED Description:  RING-H2 finger protein ATL1L
Genomic Order:  3084 Name:  ? Medtr7g073200
Secondary Identifier:  ? PAC:31078667
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g073200 0.5kb upstream 0.5kb upstream 2132 true chr7: 27330843-27332974 Medicago truncatula
Medtr7g073200 0.5kb upstream 0.5kb upstream 500 false chr7: 27330843-27331342 Medicago truncatula
Medtr7g073200 0.5kb downstream 0.5kb downstream 2132 true chr7: 27331343-27333474 Medicago truncatula
Medtr7g073200 0.5kb downstream 0.5kb downstream 500 false chr7: 27332975-27333474 Medicago truncatula
Medtr7g073200 1.0kb upstream 1.0kb upstream 2632 true chr7: 27330343-27332974 Medicago truncatula
Medtr7g073200 1.0kb upstream 1.0kb upstream 1000 false chr7: 27330343-27331342 Medicago truncatula
Medtr7g073200 1.0kb downstream 1.0kb downstream 2632 true chr7: 27331343-27333974 Medicago truncatula
Medtr7g073200 1.0kb downstream 1.0kb downstream 1000 false chr7: 27332975-27333974 Medicago truncatula
Medtr7g073200 2.0kb upstream 2.0kb upstream 3632 true chr7: 27329343-27332974 Medicago truncatula
Medtr7g073200 2.0kb upstream 2.0kb upstream 2000 false chr7: 27329343-27331342 Medicago truncatula
Medtr7g073200 2.0kb downstream 2.0kb downstream 3632 true chr7: 27331343-27334974 Medicago truncatula
Medtr7g073200 2.0kb downstream 2.0kb downstream 2000 false chr7: 27332975-27334974 Medicago truncatula
Medtr7g073200 5.0kb upstream 5.0kb upstream 6632 true chr7: 27326343-27332974 Medicago truncatula
Medtr7g073200 5.0kb upstream 5.0kb upstream 5000 false chr7: 27326343-27331342 Medicago truncatula
Medtr7g073200 5.0kb downstream 5.0kb downstream 6632 true chr7: 27331343-27337974 Medicago truncatula
Medtr7g073200 5.0kb downstream 5.0kb downstream 5000 false chr7: 27332975-27337974 Medicago truncatula
Medtr7g073200 10.0kb upstream 10.0kb upstream 11632 true chr7: 27321343-27332974 Medicago truncatula
Medtr7g073200 10.0kb upstream 10.0kb upstream 10000 false chr7: 27321343-27331342 Medicago truncatula
Medtr7g073200 10.0kb downstream 10.0kb downstream 11632 true chr7: 27331343-27342974 Medicago truncatula
Medtr7g073200 10.0kb downstream 10.0kb downstream 10000 false chr7: 27332975-27342974 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311003 5265 Fabidae View MSA
124069529 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.148       Low
cufflinks 0.407        
cufflinks 0.244        
cufflinks 0.687        
cufflinks 0.844       High
cufflinks 0.337        
cufflinks 0.812       High
cufflinks 0.375        
cufflinks 0.248        

0 Strain