Gene : Medtr7g073970 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.5.1.39 - 4-hydroxybenzoate polyprenyltransferase / 4-hydroxybenzoate nonaprenyltransferase Description:  4-hydroxybenzoate polyprenyltransferase
Genomic Order:  3123 Name:  ? Medtr7g073970
Secondary Identifier:  ? PAC:31079372
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5871 Medicago truncatula pathologic  
Mtruncatula PWY-5872 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g073970 0.5kb upstream 0.5kb upstream 4335 true chr7: 27602578-27606912 Medicago truncatula
Medtr7g073970 0.5kb upstream 0.5kb upstream 500 false chr7: 27602578-27603077 Medicago truncatula
Medtr7g073970 0.5kb downstream 0.5kb downstream 4335 true chr7: 27603078-27607412 Medicago truncatula
Medtr7g073970 0.5kb downstream 0.5kb downstream 500 false chr7: 27606913-27607412 Medicago truncatula
Medtr7g073970 1.0kb upstream 1.0kb upstream 4835 true chr7: 27602078-27606912 Medicago truncatula
Medtr7g073970 1.0kb upstream 1.0kb upstream 1000 false chr7: 27602078-27603077 Medicago truncatula
Medtr7g073970 1.0kb downstream 1.0kb downstream 4835 true chr7: 27603078-27607912 Medicago truncatula
Medtr7g073970 1.0kb downstream 1.0kb downstream 1000 false chr7: 27606913-27607912 Medicago truncatula
Medtr7g073970 2.0kb upstream 2.0kb upstream 5835 true chr7: 27601078-27606912 Medicago truncatula
Medtr7g073970 2.0kb upstream 2.0kb upstream 2000 false chr7: 27601078-27603077 Medicago truncatula
Medtr7g073970 2.0kb downstream 2.0kb downstream 5835 true chr7: 27603078-27608912 Medicago truncatula
Medtr7g073970 2.0kb downstream 2.0kb downstream 2000 false chr7: 27606913-27608912 Medicago truncatula
Medtr7g073970 5.0kb upstream 5.0kb upstream 8835 true chr7: 27598078-27606912 Medicago truncatula
Medtr7g073970 5.0kb upstream 5.0kb upstream 5000 false chr7: 27598078-27603077 Medicago truncatula
Medtr7g073970 5.0kb downstream 5.0kb downstream 8835 true chr7: 27603078-27611912 Medicago truncatula
Medtr7g073970 5.0kb downstream 5.0kb downstream 5000 false chr7: 27606913-27611912 Medicago truncatula
Medtr7g073970 10.0kb upstream 10.0kb upstream 13835 true chr7: 27593078-27606912 Medicago truncatula
Medtr7g073970 10.0kb upstream 10.0kb upstream 10000 false chr7: 27593078-27603077 Medicago truncatula
Medtr7g073970 10.0kb downstream 10.0kb downstream 13835 true chr7: 27603078-27616912 Medicago truncatula
Medtr7g073970 10.0kb downstream 10.0kb downstream 10000 false chr7: 27606913-27616912 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305229 5265 Fabidae View MSA
124066892 5270 Rosid View MSA
123737843 5271 Pentapetalae View MSA
122788354 5272 Eudicot View MSA
122042592 5273 Angiosperm View MSA
121344514 5274 Embryophyte View MSA
123428392 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.326        
cufflinks 0.993        
cufflinks 1.192        
cufflinks 0.176       Low
cufflinks 2.355       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.233       Low
cufflinks 0.927        
cufflinks 0.401        

0 Strain