Gene : Medtr7g075520 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23074:SF86 - SPASTIN Description:  AAA-type ATPase family protein
Genomic Order:  3215 Name:  ? Medtr7g075520
Secondary Identifier:  ? PAC:31078627
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g075520 0.5kb upstream 0.5kb upstream 6228 true chr7: 28277213-28283440 Medicago truncatula
Medtr7g075520 0.5kb upstream 0.5kb upstream 500 false chr7: 28282941-28283440 Medicago truncatula
Medtr7g075520 0.5kb downstream 0.5kb downstream 6228 true chr7: 28276713-28282940 Medicago truncatula
Medtr7g075520 0.5kb downstream 0.5kb downstream 500 false chr7: 28276713-28277212 Medicago truncatula
Medtr7g075520 1.0kb upstream 1.0kb upstream 6728 true chr7: 28277213-28283940 Medicago truncatula
Medtr7g075520 1.0kb upstream 1.0kb upstream 1000 false chr7: 28282941-28283940 Medicago truncatula
Medtr7g075520 1.0kb downstream 1.0kb downstream 6728 true chr7: 28276213-28282940 Medicago truncatula
Medtr7g075520 1.0kb downstream 1.0kb downstream 1000 false chr7: 28276213-28277212 Medicago truncatula
Medtr7g075520 2.0kb upstream 2.0kb upstream 7728 true chr7: 28277213-28284940 Medicago truncatula
Medtr7g075520 2.0kb upstream 2.0kb upstream 2000 false chr7: 28282941-28284940 Medicago truncatula
Medtr7g075520 2.0kb downstream 2.0kb downstream 7728 true chr7: 28275213-28282940 Medicago truncatula
Medtr7g075520 2.0kb downstream 2.0kb downstream 2000 false chr7: 28275213-28277212 Medicago truncatula
Medtr7g075520 5.0kb upstream 5.0kb upstream 10728 true chr7: 28277213-28287940 Medicago truncatula
Medtr7g075520 5.0kb upstream 5.0kb upstream 5000 false chr7: 28282941-28287940 Medicago truncatula
Medtr7g075520 5.0kb downstream 5.0kb downstream 10728 true chr7: 28272213-28282940 Medicago truncatula
Medtr7g075520 5.0kb downstream 5.0kb downstream 5000 false chr7: 28272213-28277212 Medicago truncatula
Medtr7g075520 10.0kb upstream 10.0kb upstream 15728 true chr7: 28277213-28292940 Medicago truncatula
Medtr7g075520 10.0kb upstream 10.0kb upstream 10000 false chr7: 28282941-28292940 Medicago truncatula
Medtr7g075520 10.0kb downstream 10.0kb downstream 15728 true chr7: 28267213-28282940 Medicago truncatula
Medtr7g075520 10.0kb downstream 10.0kb downstream 10000 false chr7: 28267213-28277212 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300232 5265 Fabidae View MSA
124063142 5270 Rosid View MSA
123736430 5271 Pentapetalae View MSA
122793847 5272 Eudicot View MSA
122042209 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121344282 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.289       High
cufflinks 2.861        
cufflinks 3.062        
cufflinks 1.077       Low
cufflinks 2.912        
cufflinks 0.563       Low
cufflinks 2.973        
cufflinks 2.663        
cufflinks 2.648        

0 Strain