Gene : Medtr7g062120 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31636:SF14 - SCARECROW-LIKE PROTEIN 9 Description:  GRAS family transcription factor
Genomic Order:  2458 Name:  ? Medtr7g062120
Secondary Identifier:  ? PAC:31082737
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g062120 0.5kb upstream 0.5kb upstream 3579 true chr7: 22543334-22546912 Medicago truncatula
Medtr7g062120 0.5kb upstream 0.5kb upstream 500 false chr7: 22543334-22543833 Medicago truncatula
Medtr7g062120 0.5kb downstream 0.5kb downstream 3579 true chr7: 22543834-22547412 Medicago truncatula
Medtr7g062120 0.5kb downstream 0.5kb downstream 500 false chr7: 22546913-22547412 Medicago truncatula
Medtr7g062120 1.0kb upstream 1.0kb upstream 4079 true chr7: 22542834-22546912 Medicago truncatula
Medtr7g062120 1.0kb upstream 1.0kb upstream 1000 false chr7: 22542834-22543833 Medicago truncatula
Medtr7g062120 1.0kb downstream 1.0kb downstream 4079 true chr7: 22543834-22547912 Medicago truncatula
Medtr7g062120 1.0kb downstream 1.0kb downstream 1000 false chr7: 22546913-22547912 Medicago truncatula
Medtr7g062120 2.0kb upstream 2.0kb upstream 5079 true chr7: 22541834-22546912 Medicago truncatula
Medtr7g062120 2.0kb upstream 2.0kb upstream 2000 false chr7: 22541834-22543833 Medicago truncatula
Medtr7g062120 2.0kb downstream 2.0kb downstream 5079 true chr7: 22543834-22548912 Medicago truncatula
Medtr7g062120 2.0kb downstream 2.0kb downstream 2000 false chr7: 22546913-22548912 Medicago truncatula
Medtr7g062120 5.0kb upstream 5.0kb upstream 8079 true chr7: 22538834-22546912 Medicago truncatula
Medtr7g062120 5.0kb upstream 5.0kb upstream 5000 false chr7: 22538834-22543833 Medicago truncatula
Medtr7g062120 5.0kb downstream 5.0kb downstream 8079 true chr7: 22543834-22551912 Medicago truncatula
Medtr7g062120 5.0kb downstream 5.0kb downstream 5000 false chr7: 22546913-22551912 Medicago truncatula
Medtr7g062120 10.0kb upstream 10.0kb upstream 13079 true chr7: 22533834-22546912 Medicago truncatula
Medtr7g062120 10.0kb upstream 10.0kb upstream 10000 false chr7: 22533834-22543833 Medicago truncatula
Medtr7g062120 10.0kb downstream 10.0kb downstream 13079 true chr7: 22543834-22556912 Medicago truncatula
Medtr7g062120 10.0kb downstream 10.0kb downstream 10000 false chr7: 22546913-22556912 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309527 5265 Fabidae View MSA
124071892 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.586        
cufflinks 4.282        
cufflinks 7.719       High
cufflinks 0.445        
cufflinks 7.199       High
cufflinks 0.072     Low Low
cufflinks 1.078        
cufflinks 6.667        
cufflinks 0.549        

0 Strain