Gene : Medtr7g062310 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11709:SF62 - LACCASE-2 Description:  laccase/diphenol oxidase family protein
Genomic Order:  2471 Name:  ? Medtr7g062310
Secondary Identifier:  ? PAC:31080707
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5466 Medicago truncatula pathologic  
Mtruncatula PWY-6824 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g062310 0.5kb upstream 0.5kb upstream 3625 true chr7: 22634574-22638198 Medicago truncatula
Medtr7g062310 0.5kb upstream 0.5kb upstream 500 false chr7: 22637699-22638198 Medicago truncatula
Medtr7g062310 0.5kb downstream 0.5kb downstream 3625 true chr7: 22634074-22637698 Medicago truncatula
Medtr7g062310 0.5kb downstream 0.5kb downstream 500 false chr7: 22634074-22634573 Medicago truncatula
Medtr7g062310 1.0kb upstream 1.0kb upstream 4125 true chr7: 22634574-22638698 Medicago truncatula
Medtr7g062310 1.0kb upstream 1.0kb upstream 1000 false chr7: 22637699-22638698 Medicago truncatula
Medtr7g062310 1.0kb downstream 1.0kb downstream 4125 true chr7: 22633574-22637698 Medicago truncatula
Medtr7g062310 1.0kb downstream 1.0kb downstream 1000 false chr7: 22633574-22634573 Medicago truncatula
Medtr7g062310 2.0kb upstream 2.0kb upstream 5125 true chr7: 22634574-22639698 Medicago truncatula
Medtr7g062310 2.0kb upstream 2.0kb upstream 2000 false chr7: 22637699-22639698 Medicago truncatula
Medtr7g062310 2.0kb downstream 2.0kb downstream 5125 true chr7: 22632574-22637698 Medicago truncatula
Medtr7g062310 2.0kb downstream 2.0kb downstream 2000 false chr7: 22632574-22634573 Medicago truncatula
Medtr7g062310 5.0kb upstream 5.0kb upstream 8125 true chr7: 22634574-22642698 Medicago truncatula
Medtr7g062310 5.0kb upstream 5.0kb upstream 5000 false chr7: 22637699-22642698 Medicago truncatula
Medtr7g062310 5.0kb downstream 5.0kb downstream 8125 true chr7: 22629574-22637698 Medicago truncatula
Medtr7g062310 5.0kb downstream 5.0kb downstream 5000 false chr7: 22629574-22634573 Medicago truncatula
Medtr7g062310 10.0kb upstream 10.0kb upstream 13125 true chr7: 22634574-22647698 Medicago truncatula
Medtr7g062310 10.0kb upstream 10.0kb upstream 10000 false chr7: 22637699-22647698 Medicago truncatula
Medtr7g062310 10.0kb downstream 10.0kb downstream 13125 true chr7: 22624574-22637698 Medicago truncatula
Medtr7g062310 10.0kb downstream 10.0kb downstream 10000 false chr7: 22624574-22634573 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301895 5265 Fabidae View MSA
124070693 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 2.071        
cufflinks 0.442        
cufflinks 0.529        
cufflinks 2.905       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.23        
cufflinks 0.553        
cufflinks 0.575        

0 Strain