Gene : Medtr7g064090 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12859 - PRA1 PROTEIN Description:  PRA1 (prenylated RAB acceptor) family protein
Genomic Order:  2582 Name:  ? Medtr7g064090
Secondary Identifier:  ? PAC:31082552
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g064090 0.5kb upstream 0.5kb upstream 7541 true chr7: 23417361-23424901 Medicago truncatula
Medtr7g064090 0.5kb upstream 0.5kb upstream 500 false chr7: 23424402-23424901 Medicago truncatula
Medtr7g064090 0.5kb downstream 0.5kb downstream 7541 true chr7: 23416861-23424401 Medicago truncatula
Medtr7g064090 0.5kb downstream 0.5kb downstream 500 false chr7: 23416861-23417360 Medicago truncatula
Medtr7g064090 1.0kb upstream 1.0kb upstream 8041 true chr7: 23417361-23425401 Medicago truncatula
Medtr7g064090 1.0kb upstream 1.0kb upstream 1000 false chr7: 23424402-23425401 Medicago truncatula
Medtr7g064090 1.0kb downstream 1.0kb downstream 8041 true chr7: 23416361-23424401 Medicago truncatula
Medtr7g064090 1.0kb downstream 1.0kb downstream 1000 false chr7: 23416361-23417360 Medicago truncatula
Medtr7g064090 2.0kb upstream 2.0kb upstream 9041 true chr7: 23417361-23426401 Medicago truncatula
Medtr7g064090 2.0kb upstream 2.0kb upstream 2000 false chr7: 23424402-23426401 Medicago truncatula
Medtr7g064090 2.0kb downstream 2.0kb downstream 9041 true chr7: 23415361-23424401 Medicago truncatula
Medtr7g064090 2.0kb downstream 2.0kb downstream 2000 false chr7: 23415361-23417360 Medicago truncatula
Medtr7g064090 5.0kb upstream 5.0kb upstream 12041 true chr7: 23417361-23429401 Medicago truncatula
Medtr7g064090 5.0kb upstream 5.0kb upstream 5000 false chr7: 23424402-23429401 Medicago truncatula
Medtr7g064090 5.0kb downstream 5.0kb downstream 12041 true chr7: 23412361-23424401 Medicago truncatula
Medtr7g064090 5.0kb downstream 5.0kb downstream 5000 false chr7: 23412361-23417360 Medicago truncatula
Medtr7g064090 10.0kb upstream 10.0kb upstream 17041 true chr7: 23417361-23434401 Medicago truncatula
Medtr7g064090 10.0kb upstream 10.0kb upstream 10000 false chr7: 23424402-23434401 Medicago truncatula
Medtr7g064090 10.0kb downstream 10.0kb downstream 17041 true chr7: 23407361-23424401 Medicago truncatula
Medtr7g064090 10.0kb downstream 10.0kb downstream 10000 false chr7: 23407361-23417360 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041278 5273 Angiosperm View MSA
122300281 5265 Fabidae View MSA
124062256 5270 Rosid View MSA
123752412 5271 Pentapetalae View MSA
122788524 5272 Eudicot View MSA
121345712 5274 Embryophyte View MSA
123428225 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.737        
cufflinks 2.879        
cufflinks 2.581        
cufflinks 5.12       High
cufflinks 2.8        
cufflinks 3.429        
cufflinks 3.308        
cufflinks 2.277       Low
cufflinks 6.015       High

0 Strain