Gene : Medtr7g063800 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.13.11.70 - All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Description:  carotenoid cleavage dioxygenase
Genomic Order:  2559 Name:  ? Medtr7g063800
Secondary Identifier:  ? PAC:31077757
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7101 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g063800 0.5kb upstream 0.5kb upstream 3631 true chr7: 23306087-23309717 Medicago truncatula
Medtr7g063800 0.5kb upstream 0.5kb upstream 500 false chr7: 23306087-23306586 Medicago truncatula
Medtr7g063800 0.5kb downstream 0.5kb downstream 3631 true chr7: 23306587-23310217 Medicago truncatula
Medtr7g063800 0.5kb downstream 0.5kb downstream 500 false chr7: 23309718-23310217 Medicago truncatula
Medtr7g063800 1.0kb upstream 1.0kb upstream 4131 true chr7: 23305587-23309717 Medicago truncatula
Medtr7g063800 1.0kb upstream 1.0kb upstream 1000 false chr7: 23305587-23306586 Medicago truncatula
Medtr7g063800 1.0kb downstream 1.0kb downstream 4131 true chr7: 23306587-23310717 Medicago truncatula
Medtr7g063800 1.0kb downstream 1.0kb downstream 1000 false chr7: 23309718-23310717 Medicago truncatula
Medtr7g063800 2.0kb upstream 2.0kb upstream 5131 true chr7: 23304587-23309717 Medicago truncatula
Medtr7g063800 2.0kb upstream 2.0kb upstream 2000 false chr7: 23304587-23306586 Medicago truncatula
Medtr7g063800 2.0kb downstream 2.0kb downstream 5131 true chr7: 23306587-23311717 Medicago truncatula
Medtr7g063800 2.0kb downstream 2.0kb downstream 2000 false chr7: 23309718-23311717 Medicago truncatula
Medtr7g063800 5.0kb upstream 5.0kb upstream 8131 true chr7: 23301587-23309717 Medicago truncatula
Medtr7g063800 5.0kb upstream 5.0kb upstream 5000 false chr7: 23301587-23306586 Medicago truncatula
Medtr7g063800 5.0kb downstream 5.0kb downstream 8131 true chr7: 23306587-23314717 Medicago truncatula
Medtr7g063800 5.0kb downstream 5.0kb downstream 5000 false chr7: 23309718-23314717 Medicago truncatula
Medtr7g063800 10.0kb upstream 10.0kb upstream 13131 true chr7: 23296587-23309717 Medicago truncatula
Medtr7g063800 10.0kb upstream 10.0kb upstream 10000 false chr7: 23296587-23306586 Medicago truncatula
Medtr7g063800 10.0kb downstream 10.0kb downstream 13131 true chr7: 23306587-23319717 Medicago truncatula
Medtr7g063800 10.0kb downstream 10.0kb downstream 10000 false chr7: 23309718-23319717 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305580 5265 Fabidae View MSA
124065320 5270 Rosid View MSA
123738795 5271 Pentapetalae View MSA
122791259 5272 Eudicot View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain