Gene : Medtr7g065100 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG1781 - Small Nuclear ribonucleoprotein splicing factor Description:  u6 snRNA-associated-like-Smprotein
Genomic Order:  2607 Name:  ? Medtr7g065100
Secondary Identifier:  ? PAC:31081707
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g065100 0.5kb upstream 0.5kb upstream 5134 true chr7: 23712044-23717177 Medicago truncatula
Medtr7g065100 0.5kb upstream 0.5kb upstream 500 false chr7: 23716678-23717177 Medicago truncatula
Medtr7g065100 0.5kb downstream 0.5kb downstream 5134 true chr7: 23711544-23716677 Medicago truncatula
Medtr7g065100 0.5kb downstream 0.5kb downstream 500 false chr7: 23711544-23712043 Medicago truncatula
Medtr7g065100 1.0kb upstream 1.0kb upstream 5634 true chr7: 23712044-23717677 Medicago truncatula
Medtr7g065100 1.0kb upstream 1.0kb upstream 1000 false chr7: 23716678-23717677 Medicago truncatula
Medtr7g065100 1.0kb downstream 1.0kb downstream 5634 true chr7: 23711044-23716677 Medicago truncatula
Medtr7g065100 1.0kb downstream 1.0kb downstream 1000 false chr7: 23711044-23712043 Medicago truncatula
Medtr7g065100 2.0kb upstream 2.0kb upstream 6634 true chr7: 23712044-23718677 Medicago truncatula
Medtr7g065100 2.0kb upstream 2.0kb upstream 2000 false chr7: 23716678-23718677 Medicago truncatula
Medtr7g065100 2.0kb downstream 2.0kb downstream 6634 true chr7: 23710044-23716677 Medicago truncatula
Medtr7g065100 2.0kb downstream 2.0kb downstream 2000 false chr7: 23710044-23712043 Medicago truncatula
Medtr7g065100 5.0kb upstream 5.0kb upstream 9634 true chr7: 23712044-23721677 Medicago truncatula
Medtr7g065100 5.0kb upstream 5.0kb upstream 5000 false chr7: 23716678-23721677 Medicago truncatula
Medtr7g065100 5.0kb downstream 5.0kb downstream 9634 true chr7: 23707044-23716677 Medicago truncatula
Medtr7g065100 5.0kb downstream 5.0kb downstream 5000 false chr7: 23707044-23712043 Medicago truncatula
Medtr7g065100 10.0kb upstream 10.0kb upstream 14634 true chr7: 23712044-23726677 Medicago truncatula
Medtr7g065100 10.0kb upstream 10.0kb upstream 10000 false chr7: 23716678-23726677 Medicago truncatula
Medtr7g065100 10.0kb downstream 10.0kb downstream 14634 true chr7: 23702044-23716677 Medicago truncatula
Medtr7g065100 10.0kb downstream 10.0kb downstream 10000 false chr7: 23702044-23712043 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306096 5265 Fabidae View MSA
124062559 5270 Rosid View MSA
123737808 5271 Pentapetalae View MSA
122791526 5272 Eudicot View MSA
122051368 5273 Angiosperm View MSA
121349484 5274 Embryophyte View MSA
123423999 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.0       Low
cufflinks 4.445        
cufflinks 5.651        
cufflinks 11.305     High High
cufflinks 5.115        
cufflinks 12.89     High High
cufflinks 6.768        
cufflinks 4.503        
cufflinks 7.322        

0 Strain