Gene : Medtr7g050350 M. truncatula Mt4.0v1
Defline:  (1 of 27) PTHR23042//PTHR23042:SF57 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS Description:  basic helix loop helix protein BHLH17, putative
Genomic Order:  1848 Name:  ? Medtr7g050350
Secondary Identifier:  ? PAC:31084065
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g050350 0.5kb upstream 0.5kb upstream 1733 true chr7: 17563967-17565699 Medicago truncatula
Medtr7g050350 0.5kb upstream 0.5kb upstream 500 false chr7: 17563967-17564466 Medicago truncatula
Medtr7g050350 0.5kb downstream 0.5kb downstream 1733 true chr7: 17564467-17566199 Medicago truncatula
Medtr7g050350 0.5kb downstream 0.5kb downstream 500 false chr7: 17565700-17566199 Medicago truncatula
Medtr7g050350 1.0kb upstream 1.0kb upstream 2233 true chr7: 17563467-17565699 Medicago truncatula
Medtr7g050350 1.0kb upstream 1.0kb upstream 1000 false chr7: 17563467-17564466 Medicago truncatula
Medtr7g050350 1.0kb downstream 1.0kb downstream 2233 true chr7: 17564467-17566699 Medicago truncatula
Medtr7g050350 1.0kb downstream 1.0kb downstream 1000 false chr7: 17565700-17566699 Medicago truncatula
Medtr7g050350 2.0kb upstream 2.0kb upstream 3233 true chr7: 17562467-17565699 Medicago truncatula
Medtr7g050350 2.0kb upstream 2.0kb upstream 2000 false chr7: 17562467-17564466 Medicago truncatula
Medtr7g050350 2.0kb downstream 2.0kb downstream 3233 true chr7: 17564467-17567699 Medicago truncatula
Medtr7g050350 2.0kb downstream 2.0kb downstream 2000 false chr7: 17565700-17567699 Medicago truncatula
Medtr7g050350 5.0kb upstream 5.0kb upstream 6233 true chr7: 17559467-17565699 Medicago truncatula
Medtr7g050350 5.0kb upstream 5.0kb upstream 5000 false chr7: 17559467-17564466 Medicago truncatula
Medtr7g050350 5.0kb downstream 5.0kb downstream 6233 true chr7: 17564467-17570699 Medicago truncatula
Medtr7g050350 5.0kb downstream 5.0kb downstream 5000 false chr7: 17565700-17570699 Medicago truncatula
Medtr7g050350 10.0kb upstream 10.0kb upstream 11233 true chr7: 17554467-17565699 Medicago truncatula
Medtr7g050350 10.0kb upstream 10.0kb upstream 10000 false chr7: 17554467-17564466 Medicago truncatula
Medtr7g050350 10.0kb downstream 10.0kb downstream 11233 true chr7: 17564467-17575699 Medicago truncatula
Medtr7g050350 10.0kb downstream 10.0kb downstream 10000 false chr7: 17565700-17575699 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122287812 5265 Fabidae View MSA
124071419 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain