Gene : Medtr7g051460 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR30128:SF8 - PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1 Description:  photosystem I P700 chlorophyll A apoprotein
Genomic Order:  1903 Name:  ? Medtr7g051460
Secondary Identifier:  ? PAC:31082405
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PHOTOALL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-101 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g051460 0.5kb upstream 0.5kb upstream 1587 true chr7: 18043869-18045455 Medicago truncatula
Medtr7g051460 0.5kb upstream 0.5kb upstream 500 false chr7: 18044956-18045455 Medicago truncatula
Medtr7g051460 0.5kb downstream 0.5kb downstream 1587 true chr7: 18043369-18044955 Medicago truncatula
Medtr7g051460 0.5kb downstream 0.5kb downstream 500 false chr7: 18043369-18043868 Medicago truncatula
Medtr7g051460 1.0kb upstream 1.0kb upstream 2087 true chr7: 18043869-18045955 Medicago truncatula
Medtr7g051460 1.0kb upstream 1.0kb upstream 1000 false chr7: 18044956-18045955 Medicago truncatula
Medtr7g051460 1.0kb downstream 1.0kb downstream 2087 true chr7: 18042869-18044955 Medicago truncatula
Medtr7g051460 1.0kb downstream 1.0kb downstream 1000 false chr7: 18042869-18043868 Medicago truncatula
Medtr7g051460 2.0kb upstream 2.0kb upstream 3087 true chr7: 18043869-18046955 Medicago truncatula
Medtr7g051460 2.0kb upstream 2.0kb upstream 2000 false chr7: 18044956-18046955 Medicago truncatula
Medtr7g051460 2.0kb downstream 2.0kb downstream 3087 true chr7: 18041869-18044955 Medicago truncatula
Medtr7g051460 2.0kb downstream 2.0kb downstream 2000 false chr7: 18041869-18043868 Medicago truncatula
Medtr7g051460 5.0kb upstream 5.0kb upstream 6087 true chr7: 18043869-18049955 Medicago truncatula
Medtr7g051460 5.0kb upstream 5.0kb upstream 5000 false chr7: 18044956-18049955 Medicago truncatula
Medtr7g051460 5.0kb downstream 5.0kb downstream 6087 true chr7: 18038869-18044955 Medicago truncatula
Medtr7g051460 5.0kb downstream 5.0kb downstream 5000 false chr7: 18038869-18043868 Medicago truncatula
Medtr7g051460 10.0kb upstream 10.0kb upstream 11087 true chr7: 18043869-18054955 Medicago truncatula
Medtr7g051460 10.0kb upstream 10.0kb upstream 10000 false chr7: 18044956-18054955 Medicago truncatula
Medtr7g051460 10.0kb downstream 10.0kb downstream 11087 true chr7: 18033869-18044955 Medicago truncatula
Medtr7g051460 10.0kb downstream 10.0kb downstream 10000 false chr7: 18033869-18043868 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029302 5273 Angiosperm View MSA
122267740 5265 Fabidae Singleton cluster - no MSA
124008655 5270 Rosid Singleton cluster - no MSA
123753251 5271 Pentapetalae View MSA
122775013 5272 Eudicot View MSA
121350541 5274 Embryophyte View MSA
123381782 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain