Gene : Medtr7g053450 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR10394 - 40S RIBOSOMAL PROTEIN S8 Description:  40S ribosomal S8-like protein
Genomic Order:  1988 Name:  ? Medtr7g053450
Secondary Identifier:  ? PAC:31078848
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g053450 0.5kb upstream 0.5kb upstream 3730 true chr7: 18834797-18838526 Medicago truncatula
Medtr7g053450 0.5kb upstream 0.5kb upstream 500 false chr7: 18838027-18838526 Medicago truncatula
Medtr7g053450 0.5kb downstream 0.5kb downstream 3730 true chr7: 18834297-18838026 Medicago truncatula
Medtr7g053450 0.5kb downstream 0.5kb downstream 500 false chr7: 18834297-18834796 Medicago truncatula
Medtr7g053450 1.0kb upstream 1.0kb upstream 4230 true chr7: 18834797-18839026 Medicago truncatula
Medtr7g053450 1.0kb upstream 1.0kb upstream 1000 false chr7: 18838027-18839026 Medicago truncatula
Medtr7g053450 1.0kb downstream 1.0kb downstream 4230 true chr7: 18833797-18838026 Medicago truncatula
Medtr7g053450 1.0kb downstream 1.0kb downstream 1000 false chr7: 18833797-18834796 Medicago truncatula
Medtr7g053450 2.0kb upstream 2.0kb upstream 5230 true chr7: 18834797-18840026 Medicago truncatula
Medtr7g053450 2.0kb upstream 2.0kb upstream 2000 false chr7: 18838027-18840026 Medicago truncatula
Medtr7g053450 2.0kb downstream 2.0kb downstream 5230 true chr7: 18832797-18838026 Medicago truncatula
Medtr7g053450 2.0kb downstream 2.0kb downstream 2000 false chr7: 18832797-18834796 Medicago truncatula
Medtr7g053450 5.0kb upstream 5.0kb upstream 8230 true chr7: 18834797-18843026 Medicago truncatula
Medtr7g053450 5.0kb upstream 5.0kb upstream 5000 false chr7: 18838027-18843026 Medicago truncatula
Medtr7g053450 5.0kb downstream 5.0kb downstream 8230 true chr7: 18829797-18838026 Medicago truncatula
Medtr7g053450 5.0kb downstream 5.0kb downstream 5000 false chr7: 18829797-18834796 Medicago truncatula
Medtr7g053450 10.0kb upstream 10.0kb upstream 13230 true chr7: 18834797-18848026 Medicago truncatula
Medtr7g053450 10.0kb upstream 10.0kb upstream 10000 false chr7: 18838027-18848026 Medicago truncatula
Medtr7g053450 10.0kb downstream 10.0kb downstream 13230 true chr7: 18824797-18838026 Medicago truncatula
Medtr7g053450 10.0kb downstream 10.0kb downstream 10000 false chr7: 18824797-18834796 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313360 5265 Fabidae View MSA
124069380 5270 Rosid View MSA
123753102 5271 Pentapetalae View MSA
122794895 5272 Eudicot View MSA
122047330 5273 Angiosperm View MSA
121343984 5274 Embryophyte View MSA
123428186 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.04     High Low
cufflinks 40.132     High  
cufflinks 33.399     High  
cufflinks 48.468     High  
cufflinks 75.984     High High
cufflinks 18.795     High Low
cufflinks 45.898     High  
cufflinks 43.848     High  
cufflinks 60.546     High  

0 Strain