Gene : Medtr7g053220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23089:SF7 - HIT FAMILY PROTEIN 1 Description:  histidine triad nucleotide-binding protein
Genomic Order:  1969 Name:  ? Medtr7g053220
Secondary Identifier:  ? PAC:31082283
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g053220 0.5kb upstream 0.5kb upstream 5245 true chr7: 18713328-18718572 Medicago truncatula
Medtr7g053220 0.5kb upstream 0.5kb upstream 500 false chr7: 18713328-18713827 Medicago truncatula
Medtr7g053220 0.5kb downstream 0.5kb downstream 5245 true chr7: 18713828-18719072 Medicago truncatula
Medtr7g053220 0.5kb downstream 0.5kb downstream 500 false chr7: 18718573-18719072 Medicago truncatula
Medtr7g053220 1.0kb upstream 1.0kb upstream 5745 true chr7: 18712828-18718572 Medicago truncatula
Medtr7g053220 1.0kb upstream 1.0kb upstream 1000 false chr7: 18712828-18713827 Medicago truncatula
Medtr7g053220 1.0kb downstream 1.0kb downstream 5745 true chr7: 18713828-18719572 Medicago truncatula
Medtr7g053220 1.0kb downstream 1.0kb downstream 1000 false chr7: 18718573-18719572 Medicago truncatula
Medtr7g053220 2.0kb upstream 2.0kb upstream 6745 true chr7: 18711828-18718572 Medicago truncatula
Medtr7g053220 2.0kb upstream 2.0kb upstream 2000 false chr7: 18711828-18713827 Medicago truncatula
Medtr7g053220 2.0kb downstream 2.0kb downstream 6745 true chr7: 18713828-18720572 Medicago truncatula
Medtr7g053220 2.0kb downstream 2.0kb downstream 2000 false chr7: 18718573-18720572 Medicago truncatula
Medtr7g053220 5.0kb upstream 5.0kb upstream 9745 true chr7: 18708828-18718572 Medicago truncatula
Medtr7g053220 5.0kb upstream 5.0kb upstream 5000 false chr7: 18708828-18713827 Medicago truncatula
Medtr7g053220 5.0kb downstream 5.0kb downstream 9745 true chr7: 18713828-18723572 Medicago truncatula
Medtr7g053220 5.0kb downstream 5.0kb downstream 5000 false chr7: 18718573-18723572 Medicago truncatula
Medtr7g053220 10.0kb upstream 10.0kb upstream 14745 true chr7: 18703828-18718572 Medicago truncatula
Medtr7g053220 10.0kb upstream 10.0kb upstream 10000 false chr7: 18703828-18713827 Medicago truncatula
Medtr7g053220 10.0kb downstream 10.0kb downstream 14745 true chr7: 18713828-18728572 Medicago truncatula
Medtr7g053220 10.0kb downstream 10.0kb downstream 10000 false chr7: 18718573-18728572 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302528 5265 Fabidae View MSA
124050328 5270 Rosid View MSA
123747723 5271 Pentapetalae View MSA
122788071 5272 Eudicot View MSA
122049116 5273 Angiosperm View MSA
121311254 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.733     High  
cufflinks 9.348        
cufflinks 10.934     High  
cufflinks 9.797     High  
cufflinks 8.026        
cufflinks 6.013       Low
cufflinks 14.436     High High
cufflinks 13.571     High High
cufflinks 11.976     High  

0 Strain