Gene : Medtr7g055910 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11652//PTHR11652:SF17 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER Description:  S12-like, 30S ribosomal protein S12 subfamily protein
Genomic Order:  2004 Name:  ? Medtr7g055910
Secondary Identifier:  ? PAC:31083844
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g055910 0.5kb upstream 0.5kb upstream 1858 true chr7: 18959550-18961407 Medicago truncatula
Medtr7g055910 0.5kb upstream 0.5kb upstream 500 false chr7: 18959550-18960049 Medicago truncatula
Medtr7g055910 0.5kb downstream 0.5kb downstream 1858 true chr7: 18960050-18961907 Medicago truncatula
Medtr7g055910 0.5kb downstream 0.5kb downstream 500 false chr7: 18961408-18961907 Medicago truncatula
Medtr7g055910 1.0kb upstream 1.0kb upstream 2358 true chr7: 18959050-18961407 Medicago truncatula
Medtr7g055910 1.0kb upstream 1.0kb upstream 1000 false chr7: 18959050-18960049 Medicago truncatula
Medtr7g055910 1.0kb downstream 1.0kb downstream 2358 true chr7: 18960050-18962407 Medicago truncatula
Medtr7g055910 1.0kb downstream 1.0kb downstream 1000 false chr7: 18961408-18962407 Medicago truncatula
Medtr7g055910 2.0kb upstream 2.0kb upstream 3358 true chr7: 18958050-18961407 Medicago truncatula
Medtr7g055910 2.0kb upstream 2.0kb upstream 2000 false chr7: 18958050-18960049 Medicago truncatula
Medtr7g055910 2.0kb downstream 2.0kb downstream 3358 true chr7: 18960050-18963407 Medicago truncatula
Medtr7g055910 2.0kb downstream 2.0kb downstream 2000 false chr7: 18961408-18963407 Medicago truncatula
Medtr7g055910 5.0kb upstream 5.0kb upstream 6358 true chr7: 18955050-18961407 Medicago truncatula
Medtr7g055910 5.0kb upstream 5.0kb upstream 5000 false chr7: 18955050-18960049 Medicago truncatula
Medtr7g055910 5.0kb downstream 5.0kb downstream 6358 true chr7: 18960050-18966407 Medicago truncatula
Medtr7g055910 5.0kb downstream 5.0kb downstream 5000 false chr7: 18961408-18966407 Medicago truncatula
Medtr7g055910 10.0kb upstream 10.0kb upstream 11358 true chr7: 18950050-18961407 Medicago truncatula
Medtr7g055910 10.0kb upstream 10.0kb upstream 10000 false chr7: 18950050-18960049 Medicago truncatula
Medtr7g055910 10.0kb downstream 10.0kb downstream 11358 true chr7: 18960050-18971407 Medicago truncatula
Medtr7g055910 10.0kb downstream 10.0kb downstream 10000 false chr7: 18961408-18971407 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122268100 5265 Fabidae Singleton cluster - no MSA
124008992 5270 Rosid Singleton cluster - no MSA
123750891 5271 Pentapetalae View MSA
122796702 5272 Eudicot View MSA
122044358 5273 Angiosperm View MSA
123429171 5275 Viridiplantae View MSA
121351184 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.065     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain