Gene : Medtr7g056147 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33159:SF6 - RPM1-INTERACTING PROTEIN 4 Description:  RPM1 interacting protein 4 transcript protein
Genomic Order:  2084 Name:  ? Medtr7g056147
Secondary Identifier:  ? PAC:31082826
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g056147 0.5kb upstream 0.5kb upstream 4649 true chr7: 19566792-19571440 Medicago truncatula
Medtr7g056147 0.5kb upstream 0.5kb upstream 500 false chr7: 19566792-19567291 Medicago truncatula
Medtr7g056147 0.5kb downstream 0.5kb downstream 4649 true chr7: 19567292-19571940 Medicago truncatula
Medtr7g056147 0.5kb downstream 0.5kb downstream 500 false chr7: 19571441-19571940 Medicago truncatula
Medtr7g056147 1.0kb upstream 1.0kb upstream 5149 true chr7: 19566292-19571440 Medicago truncatula
Medtr7g056147 1.0kb upstream 1.0kb upstream 1000 false chr7: 19566292-19567291 Medicago truncatula
Medtr7g056147 1.0kb downstream 1.0kb downstream 5149 true chr7: 19567292-19572440 Medicago truncatula
Medtr7g056147 1.0kb downstream 1.0kb downstream 1000 false chr7: 19571441-19572440 Medicago truncatula
Medtr7g056147 2.0kb upstream 2.0kb upstream 6149 true chr7: 19565292-19571440 Medicago truncatula
Medtr7g056147 2.0kb upstream 2.0kb upstream 2000 false chr7: 19565292-19567291 Medicago truncatula
Medtr7g056147 2.0kb downstream 2.0kb downstream 6149 true chr7: 19567292-19573440 Medicago truncatula
Medtr7g056147 2.0kb downstream 2.0kb downstream 2000 false chr7: 19571441-19573440 Medicago truncatula
Medtr7g056147 5.0kb upstream 5.0kb upstream 9149 true chr7: 19562292-19571440 Medicago truncatula
Medtr7g056147 5.0kb upstream 5.0kb upstream 5000 false chr7: 19562292-19567291 Medicago truncatula
Medtr7g056147 5.0kb downstream 5.0kb downstream 9149 true chr7: 19567292-19576440 Medicago truncatula
Medtr7g056147 5.0kb downstream 5.0kb downstream 5000 false chr7: 19571441-19576440 Medicago truncatula
Medtr7g056147 10.0kb upstream 10.0kb upstream 14149 true chr7: 19557292-19571440 Medicago truncatula
Medtr7g056147 10.0kb upstream 10.0kb upstream 10000 false chr7: 19557292-19567291 Medicago truncatula
Medtr7g056147 10.0kb downstream 10.0kb downstream 14149 true chr7: 19567292-19581440 Medicago truncatula
Medtr7g056147 10.0kb downstream 10.0kb downstream 10000 false chr7: 19571441-19581440 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311528 5265 Fabidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.516        
cufflinks 6.827        
cufflinks 6.871        
cufflinks 18.173     High High
cufflinks 6.419        
cufflinks 8.102        
cufflinks 13.233     High  
cufflinks 6.544        
cufflinks 13.349     High High

0 Strain