Gene : Medtr7g058690 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11709:SF66 - LACCASE-17 Description:  laccase/diphenol oxidase family protein
Genomic Order:  2290 Name:  ? Medtr7g058690
Secondary Identifier:  ? PAC:31083877
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5466 Medicago truncatula pathologic  
Mtruncatula PWY-6824 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g058690 0.5kb upstream 0.5kb upstream 2945 true chr7: 21203387-21206331 Medicago truncatula
Medtr7g058690 0.5kb upstream 0.5kb upstream 500 false chr7: 21203387-21203886 Medicago truncatula
Medtr7g058690 0.5kb downstream 0.5kb downstream 2945 true chr7: 21203887-21206831 Medicago truncatula
Medtr7g058690 0.5kb downstream 0.5kb downstream 500 false chr7: 21206332-21206831 Medicago truncatula
Medtr7g058690 1.0kb upstream 1.0kb upstream 3445 true chr7: 21202887-21206331 Medicago truncatula
Medtr7g058690 1.0kb upstream 1.0kb upstream 1000 false chr7: 21202887-21203886 Medicago truncatula
Medtr7g058690 1.0kb downstream 1.0kb downstream 3445 true chr7: 21203887-21207331 Medicago truncatula
Medtr7g058690 1.0kb downstream 1.0kb downstream 1000 false chr7: 21206332-21207331 Medicago truncatula
Medtr7g058690 2.0kb upstream 2.0kb upstream 4445 true chr7: 21201887-21206331 Medicago truncatula
Medtr7g058690 2.0kb upstream 2.0kb upstream 2000 false chr7: 21201887-21203886 Medicago truncatula
Medtr7g058690 2.0kb downstream 2.0kb downstream 4445 true chr7: 21203887-21208331 Medicago truncatula
Medtr7g058690 2.0kb downstream 2.0kb downstream 2000 false chr7: 21206332-21208331 Medicago truncatula
Medtr7g058690 5.0kb upstream 5.0kb upstream 7445 true chr7: 21198887-21206331 Medicago truncatula
Medtr7g058690 5.0kb upstream 5.0kb upstream 5000 false chr7: 21198887-21203886 Medicago truncatula
Medtr7g058690 5.0kb downstream 5.0kb downstream 7445 true chr7: 21203887-21211331 Medicago truncatula
Medtr7g058690 5.0kb downstream 5.0kb downstream 5000 false chr7: 21206332-21211331 Medicago truncatula
Medtr7g058690 10.0kb upstream 10.0kb upstream 12445 true chr7: 21193887-21206331 Medicago truncatula
Medtr7g058690 10.0kb upstream 10.0kb upstream 10000 false chr7: 21193887-21203886 Medicago truncatula
Medtr7g058690 10.0kb downstream 10.0kb downstream 12445 true chr7: 21203887-21216331 Medicago truncatula
Medtr7g058690 10.0kb downstream 10.0kb downstream 10000 false chr7: 21206332-21216331 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313591 5265 Fabidae View MSA
124062715 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.284       High
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.125        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain