Gene : Medtr7g058430 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00569//PF13920 - Zinc finger, ZZ type (ZZ) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) Description:  E3 ubiquitin-protein ligase PRT1-like protein
Genomic Order:  2268 Name:  ? Medtr7g058430
Secondary Identifier:  ? PAC:31084122
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g058430 0.5kb upstream 0.5kb upstream 7041 true chr7: 21029441-21036481 Medicago truncatula
Medtr7g058430 0.5kb upstream 0.5kb upstream 500 false chr7: 21035982-21036481 Medicago truncatula
Medtr7g058430 0.5kb downstream 0.5kb downstream 7041 true chr7: 21028941-21035981 Medicago truncatula
Medtr7g058430 0.5kb downstream 0.5kb downstream 500 false chr7: 21028941-21029440 Medicago truncatula
Medtr7g058430 1.0kb upstream 1.0kb upstream 7541 true chr7: 21029441-21036981 Medicago truncatula
Medtr7g058430 1.0kb upstream 1.0kb upstream 1000 false chr7: 21035982-21036981 Medicago truncatula
Medtr7g058430 1.0kb downstream 1.0kb downstream 7541 true chr7: 21028441-21035981 Medicago truncatula
Medtr7g058430 1.0kb downstream 1.0kb downstream 1000 false chr7: 21028441-21029440 Medicago truncatula
Medtr7g058430 2.0kb upstream 2.0kb upstream 8541 true chr7: 21029441-21037981 Medicago truncatula
Medtr7g058430 2.0kb upstream 2.0kb upstream 2000 false chr7: 21035982-21037981 Medicago truncatula
Medtr7g058430 2.0kb downstream 2.0kb downstream 8541 true chr7: 21027441-21035981 Medicago truncatula
Medtr7g058430 2.0kb downstream 2.0kb downstream 2000 false chr7: 21027441-21029440 Medicago truncatula
Medtr7g058430 5.0kb upstream 5.0kb upstream 11541 true chr7: 21029441-21040981 Medicago truncatula
Medtr7g058430 5.0kb upstream 5.0kb upstream 5000 false chr7: 21035982-21040981 Medicago truncatula
Medtr7g058430 5.0kb downstream 5.0kb downstream 11541 true chr7: 21024441-21035981 Medicago truncatula
Medtr7g058430 5.0kb downstream 5.0kb downstream 5000 false chr7: 21024441-21029440 Medicago truncatula
Medtr7g058430 10.0kb upstream 10.0kb upstream 16541 true chr7: 21029441-21045981 Medicago truncatula
Medtr7g058430 10.0kb upstream 10.0kb upstream 10000 false chr7: 21035982-21045981 Medicago truncatula
Medtr7g058430 10.0kb downstream 10.0kb downstream 16541 true chr7: 21019441-21035981 Medicago truncatula
Medtr7g058430 10.0kb downstream 10.0kb downstream 10000 false chr7: 21019441-21029440 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299915 5265 Fabidae View MSA
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.256       High
cufflinks 1.657        
cufflinks 1.838        
cufflinks 1.625        
cufflinks 1.677        
cufflinks 1.393        
cufflinks 3.118       High
cufflinks 1.334       Low
cufflinks 2.297        

0 Strain