Gene : Medtr7g058500 M. truncatula Mt4.0v1
Defline:  (1 of 7) KOG4249 - Uncharacterized conserved protein Description:  UPF0420 C16orf58-like protein
Genomic Order:  2272 Name:  ? Medtr7g058500
Secondary Identifier:  ? PAC:31080200
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g058500 0.5kb upstream 0.5kb upstream 6361 true chr7: 21071900-21078260 Medicago truncatula
Medtr7g058500 0.5kb upstream 0.5kb upstream 500 false chr7: 21071900-21072399 Medicago truncatula
Medtr7g058500 0.5kb downstream 0.5kb downstream 6361 true chr7: 21072400-21078760 Medicago truncatula
Medtr7g058500 0.5kb downstream 0.5kb downstream 500 false chr7: 21078261-21078760 Medicago truncatula
Medtr7g058500 1.0kb upstream 1.0kb upstream 6861 true chr7: 21071400-21078260 Medicago truncatula
Medtr7g058500 1.0kb upstream 1.0kb upstream 1000 false chr7: 21071400-21072399 Medicago truncatula
Medtr7g058500 1.0kb downstream 1.0kb downstream 6861 true chr7: 21072400-21079260 Medicago truncatula
Medtr7g058500 1.0kb downstream 1.0kb downstream 1000 false chr7: 21078261-21079260 Medicago truncatula
Medtr7g058500 2.0kb upstream 2.0kb upstream 7861 true chr7: 21070400-21078260 Medicago truncatula
Medtr7g058500 2.0kb upstream 2.0kb upstream 2000 false chr7: 21070400-21072399 Medicago truncatula
Medtr7g058500 2.0kb downstream 2.0kb downstream 7861 true chr7: 21072400-21080260 Medicago truncatula
Medtr7g058500 2.0kb downstream 2.0kb downstream 2000 false chr7: 21078261-21080260 Medicago truncatula
Medtr7g058500 5.0kb upstream 5.0kb upstream 10861 true chr7: 21067400-21078260 Medicago truncatula
Medtr7g058500 5.0kb upstream 5.0kb upstream 5000 false chr7: 21067400-21072399 Medicago truncatula
Medtr7g058500 5.0kb downstream 5.0kb downstream 10861 true chr7: 21072400-21083260 Medicago truncatula
Medtr7g058500 5.0kb downstream 5.0kb downstream 5000 false chr7: 21078261-21083260 Medicago truncatula
Medtr7g058500 10.0kb upstream 10.0kb upstream 15861 true chr7: 21062400-21078260 Medicago truncatula
Medtr7g058500 10.0kb upstream 10.0kb upstream 10000 false chr7: 21062400-21072399 Medicago truncatula
Medtr7g058500 10.0kb downstream 10.0kb downstream 15861 true chr7: 21072400-21088260 Medicago truncatula
Medtr7g058500 10.0kb downstream 10.0kb downstream 10000 false chr7: 21078261-21088260 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306325 5265 Fabidae View MSA
124067198 5270 Rosid View MSA
123740356 5271 Pentapetalae View MSA
122792497 5272 Eudicot View MSA
122041565 5273 Angiosperm View MSA
121347717 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.04        
cufflinks 3.684       High
cufflinks 3.062        
cufflinks 1.453        
cufflinks 3.958       High
cufflinks 1.006       Low
cufflinks 1.915        
cufflinks 2.852        
cufflinks 1.348        

0 Strain