Gene : Medtr7g117120 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR33978:SF2 - EXPRESSED PROTEIN Description:  hypothetical protein
Genomic Order:  6098 Name:  ? Medtr7g117120
Secondary Identifier:  ? PAC:31080629
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g117120 0.5kb upstream 0.5kb upstream 1060 true chr7: 48371786-48372845 Medicago truncatula
Medtr7g117120 0.5kb upstream 0.5kb upstream 500 false chr7: 48371786-48372285 Medicago truncatula
Medtr7g117120 0.5kb downstream 0.5kb downstream 1060 true chr7: 48372286-48373345 Medicago truncatula
Medtr7g117120 0.5kb downstream 0.5kb downstream 500 false chr7: 48372846-48373345 Medicago truncatula
Medtr7g117120 1.0kb upstream 1.0kb upstream 1560 true chr7: 48371286-48372845 Medicago truncatula
Medtr7g117120 1.0kb upstream 1.0kb upstream 1000 false chr7: 48371286-48372285 Medicago truncatula
Medtr7g117120 1.0kb downstream 1.0kb downstream 1560 true chr7: 48372286-48373845 Medicago truncatula
Medtr7g117120 1.0kb downstream 1.0kb downstream 1000 false chr7: 48372846-48373845 Medicago truncatula
Medtr7g117120 2.0kb upstream 2.0kb upstream 2560 true chr7: 48370286-48372845 Medicago truncatula
Medtr7g117120 2.0kb upstream 2.0kb upstream 2000 false chr7: 48370286-48372285 Medicago truncatula
Medtr7g117120 2.0kb downstream 2.0kb downstream 2560 true chr7: 48372286-48374845 Medicago truncatula
Medtr7g117120 2.0kb downstream 2.0kb downstream 2000 false chr7: 48372846-48374845 Medicago truncatula
Medtr7g117120 5.0kb upstream 5.0kb upstream 5560 true chr7: 48367286-48372845 Medicago truncatula
Medtr7g117120 5.0kb upstream 5.0kb upstream 5000 false chr7: 48367286-48372285 Medicago truncatula
Medtr7g117120 5.0kb downstream 5.0kb downstream 5560 true chr7: 48372286-48377845 Medicago truncatula
Medtr7g117120 5.0kb downstream 5.0kb downstream 5000 false chr7: 48372846-48377845 Medicago truncatula
Medtr7g117120 10.0kb upstream 10.0kb upstream 10560 true chr7: 48362286-48372845 Medicago truncatula
Medtr7g117120 10.0kb upstream 10.0kb upstream 10000 false chr7: 48362286-48372285 Medicago truncatula
Medtr7g117120 10.0kb downstream 10.0kb downstream 10560 true chr7: 48372286-48382845 Medicago truncatula
Medtr7g117120 10.0kb downstream 10.0kb downstream 10000 false chr7: 48372846-48382845 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029230 5273 Angiosperm View MSA
122313823 5265 Fabidae View MSA
124073990 5270 Rosid View MSA
123746126 5271 Pentapetalae View MSA
122796980 5272 Eudicot View MSA
121298592 5274 Embryophyte View MSA
123336555 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.187        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low Low
cufflinks 1.605        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.938       High
cufflinks 1.546        
cufflinks 0.018     Low Low
cufflinks 0.237        

0 Strain