Gene : Medtr7g117200 M. truncatula Mt4.0v1
Defline:  (1 of 108) PF03106 - WRKY DNA -binding domain (WRKY) Description:  WRKY family transcription factor
Genomic Order:  6103 Name:  ? Medtr7g117200
Secondary Identifier:  ? PAC:31083339
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g117200 0.5kb upstream 0.5kb upstream 2203 true chr7: 48410617-48412819 Medicago truncatula
Medtr7g117200 0.5kb upstream 0.5kb upstream 500 false chr7: 48412320-48412819 Medicago truncatula
Medtr7g117200 0.5kb downstream 0.5kb downstream 2203 true chr7: 48410117-48412319 Medicago truncatula
Medtr7g117200 0.5kb downstream 0.5kb downstream 500 false chr7: 48410117-48410616 Medicago truncatula
Medtr7g117200 1.0kb upstream 1.0kb upstream 2703 true chr7: 48410617-48413319 Medicago truncatula
Medtr7g117200 1.0kb upstream 1.0kb upstream 1000 false chr7: 48412320-48413319 Medicago truncatula
Medtr7g117200 1.0kb downstream 1.0kb downstream 2703 true chr7: 48409617-48412319 Medicago truncatula
Medtr7g117200 1.0kb downstream 1.0kb downstream 1000 false chr7: 48409617-48410616 Medicago truncatula
Medtr7g117200 2.0kb upstream 2.0kb upstream 3703 true chr7: 48410617-48414319 Medicago truncatula
Medtr7g117200 2.0kb upstream 2.0kb upstream 2000 false chr7: 48412320-48414319 Medicago truncatula
Medtr7g117200 2.0kb downstream 2.0kb downstream 3703 true chr7: 48408617-48412319 Medicago truncatula
Medtr7g117200 2.0kb downstream 2.0kb downstream 2000 false chr7: 48408617-48410616 Medicago truncatula
Medtr7g117200 5.0kb upstream 5.0kb upstream 6703 true chr7: 48410617-48417319 Medicago truncatula
Medtr7g117200 5.0kb upstream 5.0kb upstream 5000 false chr7: 48412320-48417319 Medicago truncatula
Medtr7g117200 5.0kb downstream 5.0kb downstream 6703 true chr7: 48405617-48412319 Medicago truncatula
Medtr7g117200 5.0kb downstream 5.0kb downstream 5000 false chr7: 48405617-48410616 Medicago truncatula
Medtr7g117200 10.0kb upstream 10.0kb upstream 11703 true chr7: 48410617-48422319 Medicago truncatula
Medtr7g117200 10.0kb upstream 10.0kb upstream 10000 false chr7: 48412320-48422319 Medicago truncatula
Medtr7g117200 10.0kb downstream 10.0kb downstream 11703 true chr7: 48400617-48412319 Medicago truncatula
Medtr7g117200 10.0kb downstream 10.0kb downstream 10000 false chr7: 48400617-48410616 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312862 5265 Fabidae View MSA
124070088 5270 Rosid View MSA
123748507 5271 Pentapetalae View MSA
122792318 5272 Eudicot View MSA
122042509 5273 Angiosperm View MSA
121351570 5274 Embryophyte View MSA
123382232 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.928        
cufflinks 6.762        
cufflinks 7.952        
cufflinks 0.64       Low
cufflinks 15.215     High High
cufflinks 1.947        
cufflinks 2.331        
cufflinks 9.176     High  
cufflinks 0.887       Low

0 Strain