Gene : Medtr7g116960 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF01399//PF05470 - PCI domain (PCI) // Eukaryotic translation initiation factor 3 subunit 8 N-terminus (eIF-3c_N) Description:  eukaryotic translation initiation factor 3 subunit C
Genomic Order:  6086 Name:  ? Medtr7g116960
Secondary Identifier:  ? PAC:31079827
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g116960 0.5kb upstream 0.5kb upstream 4827 true chr7: 48297782-48302608 Medicago truncatula
Medtr7g116960 0.5kb upstream 0.5kb upstream 500 false chr7: 48302109-48302608 Medicago truncatula
Medtr7g116960 0.5kb downstream 0.5kb downstream 4827 true chr7: 48297282-48302108 Medicago truncatula
Medtr7g116960 0.5kb downstream 0.5kb downstream 500 false chr7: 48297282-48297781 Medicago truncatula
Medtr7g116960 1.0kb upstream 1.0kb upstream 5327 true chr7: 48297782-48303108 Medicago truncatula
Medtr7g116960 1.0kb upstream 1.0kb upstream 1000 false chr7: 48302109-48303108 Medicago truncatula
Medtr7g116960 1.0kb downstream 1.0kb downstream 5327 true chr7: 48296782-48302108 Medicago truncatula
Medtr7g116960 1.0kb downstream 1.0kb downstream 1000 false chr7: 48296782-48297781 Medicago truncatula
Medtr7g116960 2.0kb upstream 2.0kb upstream 6327 true chr7: 48297782-48304108 Medicago truncatula
Medtr7g116960 2.0kb upstream 2.0kb upstream 2000 false chr7: 48302109-48304108 Medicago truncatula
Medtr7g116960 2.0kb downstream 2.0kb downstream 6327 true chr7: 48295782-48302108 Medicago truncatula
Medtr7g116960 2.0kb downstream 2.0kb downstream 2000 false chr7: 48295782-48297781 Medicago truncatula
Medtr7g116960 5.0kb upstream 5.0kb upstream 9327 true chr7: 48297782-48307108 Medicago truncatula
Medtr7g116960 5.0kb upstream 5.0kb upstream 5000 false chr7: 48302109-48307108 Medicago truncatula
Medtr7g116960 5.0kb downstream 5.0kb downstream 9327 true chr7: 48292782-48302108 Medicago truncatula
Medtr7g116960 5.0kb downstream 5.0kb downstream 5000 false chr7: 48292782-48297781 Medicago truncatula
Medtr7g116960 10.0kb upstream 10.0kb upstream 14327 true chr7: 48297782-48312108 Medicago truncatula
Medtr7g116960 10.0kb upstream 10.0kb upstream 10000 false chr7: 48302109-48312108 Medicago truncatula
Medtr7g116960 10.0kb downstream 10.0kb downstream 14327 true chr7: 48287782-48302108 Medicago truncatula
Medtr7g116960 10.0kb downstream 10.0kb downstream 10000 false chr7: 48287782-48297781 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305110 5265 Fabidae View MSA
124064059 5270 Rosid View MSA
123748906 5271 Pentapetalae View MSA
122796222 5272 Eudicot View MSA
122042650 5273 Angiosperm View MSA
121345410 5274 Embryophyte View MSA
123424846 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.378       High
cufflinks 2.637        
cufflinks 2.935        
cufflinks 2.787        
cufflinks 3.819        
cufflinks 1.537       Low
cufflinks 3.641        
cufflinks 2.438        
cufflinks 7.026       High

0 Strain