Gene : Medtr7g117500 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24093:SF257 - ATPASE 6, PLASMA MEMBRANE-TYPE Description:  plasma membrane H+-ATPase
Genomic Order:  6131 Name:  ? Medtr7g117500
Secondary Identifier:  ? PAC:31080273
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g117500 0.5kb upstream 0.5kb upstream 10155 true chr7: 48656530-48666684 Medicago truncatula
Medtr7g117500 0.5kb upstream 0.5kb upstream 500 false chr7: 48656530-48657029 Medicago truncatula
Medtr7g117500 0.5kb downstream 0.5kb downstream 10155 true chr7: 48657030-48667184 Medicago truncatula
Medtr7g117500 0.5kb downstream 0.5kb downstream 500 false chr7: 48666685-48667184 Medicago truncatula
Medtr7g117500 1.0kb upstream 1.0kb upstream 10655 true chr7: 48656030-48666684 Medicago truncatula
Medtr7g117500 1.0kb upstream 1.0kb upstream 1000 false chr7: 48656030-48657029 Medicago truncatula
Medtr7g117500 1.0kb downstream 1.0kb downstream 10655 true chr7: 48657030-48667684 Medicago truncatula
Medtr7g117500 1.0kb downstream 1.0kb downstream 1000 false chr7: 48666685-48667684 Medicago truncatula
Medtr7g117500 2.0kb upstream 2.0kb upstream 11655 true chr7: 48655030-48666684 Medicago truncatula
Medtr7g117500 2.0kb upstream 2.0kb upstream 2000 false chr7: 48655030-48657029 Medicago truncatula
Medtr7g117500 2.0kb downstream 2.0kb downstream 11655 true chr7: 48657030-48668684 Medicago truncatula
Medtr7g117500 2.0kb downstream 2.0kb downstream 2000 false chr7: 48666685-48668684 Medicago truncatula
Medtr7g117500 5.0kb upstream 5.0kb upstream 14655 true chr7: 48652030-48666684 Medicago truncatula
Medtr7g117500 5.0kb upstream 5.0kb upstream 5000 false chr7: 48652030-48657029 Medicago truncatula
Medtr7g117500 5.0kb downstream 5.0kb downstream 14655 true chr7: 48657030-48671684 Medicago truncatula
Medtr7g117500 5.0kb downstream 5.0kb downstream 5000 false chr7: 48666685-48671684 Medicago truncatula
Medtr7g117500 10.0kb upstream 10.0kb upstream 19655 true chr7: 48647030-48666684 Medicago truncatula
Medtr7g117500 10.0kb upstream 10.0kb upstream 10000 false chr7: 48647030-48657029 Medicago truncatula
Medtr7g117500 10.0kb downstream 10.0kb downstream 19655 true chr7: 48657030-48676684 Medicago truncatula
Medtr7g117500 10.0kb downstream 10.0kb downstream 10000 false chr7: 48666685-48676684 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305189 5265 Fabidae View MSA
124069030 5270 Rosid View MSA
123751017 5271 Pentapetalae View MSA
122796712 5272 Eudicot View MSA
122050656 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.013     Low High
cufflinks 0.006     Low  
cufflinks 0.005     Low  
cufflinks 0.002     Low Low
cufflinks 0.012     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.006     Low  
cufflinks 0.006     Low  

0 Strain