Gene : Medtr7g117380 M. truncatula Mt4.0v1
Defline:  (1 of 9) PF07279 - Protein of unknown function (DUF1442) (DUF1442) Description:  DUF1442 family protein
Genomic Order:  6113 Name:  ? Medtr7g117380
Secondary Identifier:  ? PAC:31079166
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g117380 0.5kb upstream 0.5kb upstream 2219 true chr7: 48495659-48497877 Medicago truncatula
Medtr7g117380 0.5kb upstream 0.5kb upstream 500 false chr7: 48497378-48497877 Medicago truncatula
Medtr7g117380 0.5kb downstream 0.5kb downstream 2219 true chr7: 48495159-48497377 Medicago truncatula
Medtr7g117380 0.5kb downstream 0.5kb downstream 500 false chr7: 48495159-48495658 Medicago truncatula
Medtr7g117380 1.0kb upstream 1.0kb upstream 2719 true chr7: 48495659-48498377 Medicago truncatula
Medtr7g117380 1.0kb upstream 1.0kb upstream 1000 false chr7: 48497378-48498377 Medicago truncatula
Medtr7g117380 1.0kb downstream 1.0kb downstream 2719 true chr7: 48494659-48497377 Medicago truncatula
Medtr7g117380 1.0kb downstream 1.0kb downstream 1000 false chr7: 48494659-48495658 Medicago truncatula
Medtr7g117380 2.0kb upstream 2.0kb upstream 3719 true chr7: 48495659-48499377 Medicago truncatula
Medtr7g117380 2.0kb upstream 2.0kb upstream 2000 false chr7: 48497378-48499377 Medicago truncatula
Medtr7g117380 2.0kb downstream 2.0kb downstream 3719 true chr7: 48493659-48497377 Medicago truncatula
Medtr7g117380 2.0kb downstream 2.0kb downstream 2000 false chr7: 48493659-48495658 Medicago truncatula
Medtr7g117380 5.0kb upstream 5.0kb upstream 6719 true chr7: 48495659-48502377 Medicago truncatula
Medtr7g117380 5.0kb upstream 5.0kb upstream 5000 false chr7: 48497378-48502377 Medicago truncatula
Medtr7g117380 5.0kb downstream 5.0kb downstream 6719 true chr7: 48490659-48497377 Medicago truncatula
Medtr7g117380 5.0kb downstream 5.0kb downstream 5000 false chr7: 48490659-48495658 Medicago truncatula
Medtr7g117380 10.0kb upstream 10.0kb upstream 11719 true chr7: 48495659-48507377 Medicago truncatula
Medtr7g117380 10.0kb upstream 10.0kb upstream 10000 false chr7: 48497378-48507377 Medicago truncatula
Medtr7g117380 10.0kb downstream 10.0kb downstream 11719 true chr7: 48485659-48497377 Medicago truncatula
Medtr7g117380 10.0kb downstream 10.0kb downstream 10000 false chr7: 48485659-48495658 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314228 5265 Fabidae View MSA
124072823 5270 Rosid View MSA
123746429 5271 Pentapetalae View MSA
122795029 5272 Eudicot View MSA
122048699 5273 Angiosperm View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.125        
cufflinks 0.091        
cufflinks 0.083        
cufflinks 0.027     Low Low
cufflinks 0.06     Low  
cufflinks 0.196        
cufflinks 0.969       High
cufflinks 0.082        
cufflinks 1.52       High

0 Strain