Gene : Medtr7g118020 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24349//PTHR24349:SF103 - SERINE/THREONINE-PROTEIN KINASE Description:  calmodulin-domain kinase CDPK protein
Genomic Order:  6179 Name:  ? Medtr7g118020
Secondary Identifier:  ? PAC:31079582
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g118020 0.5kb upstream 0.5kb upstream 6934 true chr7: 48973096-48980029 Medicago truncatula
Medtr7g118020 0.5kb upstream 0.5kb upstream 500 false chr7: 48979530-48980029 Medicago truncatula
Medtr7g118020 0.5kb downstream 0.5kb downstream 6934 true chr7: 48972596-48979529 Medicago truncatula
Medtr7g118020 0.5kb downstream 0.5kb downstream 500 false chr7: 48972596-48973095 Medicago truncatula
Medtr7g118020 1.0kb upstream 1.0kb upstream 7434 true chr7: 48973096-48980529 Medicago truncatula
Medtr7g118020 1.0kb upstream 1.0kb upstream 1000 false chr7: 48979530-48980529 Medicago truncatula
Medtr7g118020 1.0kb downstream 1.0kb downstream 7434 true chr7: 48972096-48979529 Medicago truncatula
Medtr7g118020 1.0kb downstream 1.0kb downstream 1000 false chr7: 48972096-48973095 Medicago truncatula
Medtr7g118020 2.0kb upstream 2.0kb upstream 8434 true chr7: 48973096-48981529 Medicago truncatula
Medtr7g118020 2.0kb upstream 2.0kb upstream 2000 false chr7: 48979530-48981529 Medicago truncatula
Medtr7g118020 2.0kb downstream 2.0kb downstream 8434 true chr7: 48971096-48979529 Medicago truncatula
Medtr7g118020 2.0kb downstream 2.0kb downstream 2000 false chr7: 48971096-48973095 Medicago truncatula
Medtr7g118020 5.0kb upstream 5.0kb upstream 11434 true chr7: 48973096-48984529 Medicago truncatula
Medtr7g118020 5.0kb upstream 5.0kb upstream 5000 false chr7: 48979530-48984529 Medicago truncatula
Medtr7g118020 5.0kb downstream 5.0kb downstream 11434 true chr7: 48968096-48979529 Medicago truncatula
Medtr7g118020 5.0kb downstream 5.0kb downstream 5000 false chr7: 48968096-48973095 Medicago truncatula
Medtr7g118020 10.0kb upstream 10.0kb upstream 16434 true chr7: 48973096-48989529 Medicago truncatula
Medtr7g118020 10.0kb upstream 10.0kb upstream 10000 false chr7: 48979530-48989529 Medicago truncatula
Medtr7g118020 10.0kb downstream 10.0kb downstream 16434 true chr7: 48963096-48979529 Medicago truncatula
Medtr7g118020 10.0kb downstream 10.0kb downstream 10000 false chr7: 48963096-48973095 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307204 5265 Fabidae View MSA
124062108 5270 Rosid View MSA
123749473 5271 Pentapetalae View MSA
122789222 5272 Eudicot View MSA
122047045 5273 Angiosperm View MSA
121343860 5274 Embryophyte View MSA
123379933 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.065       Low
cufflinks 1.787        
cufflinks 1.783        
cufflinks 2.857       High
cufflinks 2.165        
cufflinks 0.89       Low
cufflinks 1.364        
cufflinks 1.543        
cufflinks 2.651       High

0 Strain