Gene : Medtr7g117700 M. truncatula Mt4.0v1
Description:  fiber protein Fb11 Genomic Order:  6157
Name:  ? Medtr7g117700 Secondary Identifier:  ? PAC:31077646
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g117700 0.5kb upstream 0.5kb upstream 2194 true chr7: 48863843-48866036 Medicago truncatula
Medtr7g117700 0.5kb upstream 0.5kb upstream 500 false chr7: 48865537-48866036 Medicago truncatula
Medtr7g117700 0.5kb downstream 0.5kb downstream 2194 true chr7: 48863343-48865536 Medicago truncatula
Medtr7g117700 0.5kb downstream 0.5kb downstream 500 false chr7: 48863343-48863842 Medicago truncatula
Medtr7g117700 1.0kb upstream 1.0kb upstream 2694 true chr7: 48863843-48866536 Medicago truncatula
Medtr7g117700 1.0kb upstream 1.0kb upstream 1000 false chr7: 48865537-48866536 Medicago truncatula
Medtr7g117700 1.0kb downstream 1.0kb downstream 2694 true chr7: 48862843-48865536 Medicago truncatula
Medtr7g117700 1.0kb downstream 1.0kb downstream 1000 false chr7: 48862843-48863842 Medicago truncatula
Medtr7g117700 2.0kb upstream 2.0kb upstream 3694 true chr7: 48863843-48867536 Medicago truncatula
Medtr7g117700 2.0kb upstream 2.0kb upstream 2000 false chr7: 48865537-48867536 Medicago truncatula
Medtr7g117700 2.0kb downstream 2.0kb downstream 3694 true chr7: 48861843-48865536 Medicago truncatula
Medtr7g117700 2.0kb downstream 2.0kb downstream 2000 false chr7: 48861843-48863842 Medicago truncatula
Medtr7g117700 5.0kb upstream 5.0kb upstream 6694 true chr7: 48863843-48870536 Medicago truncatula
Medtr7g117700 5.0kb upstream 5.0kb upstream 5000 false chr7: 48865537-48870536 Medicago truncatula
Medtr7g117700 5.0kb downstream 5.0kb downstream 6694 true chr7: 48858843-48865536 Medicago truncatula
Medtr7g117700 5.0kb downstream 5.0kb downstream 5000 false chr7: 48858843-48863842 Medicago truncatula
Medtr7g117700 10.0kb upstream 10.0kb upstream 11694 true chr7: 48863843-48875536 Medicago truncatula
Medtr7g117700 10.0kb upstream 10.0kb upstream 10000 false chr7: 48865537-48875536 Medicago truncatula
Medtr7g117700 10.0kb downstream 10.0kb downstream 11694 true chr7: 48853843-48865536 Medicago truncatula
Medtr7g117700 10.0kb downstream 10.0kb downstream 10000 false chr7: 48853843-48863842 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306834 5265 Fabidae View MSA
124064747 5270 Rosid View MSA
123747017 5271 Pentapetalae View MSA
122786153 5272 Eudicot View MSA
122046096 5273 Angiosperm View MSA
121344412 5274 Embryophyte View MSA
123380039 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.598     High  
cufflinks 24.652     High  
cufflinks 20.104     High  
cufflinks 101.01     High High
cufflinks 25.974     High  
cufflinks 175.485     High High
cufflinks 36.595     High  
cufflinks 21.742     High  
cufflinks 58.746     High  

0 Strain