Gene : Medtr7g417770 M. truncatula Mt4.0v1
Defline:  (1 of 67) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Description:  PPR containing plant-like protein
Genomic Order:  696 Name:  ? Medtr7g417770
Secondary Identifier:  ? PAC:31082715
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g417770 0.5kb upstream 0.5kb upstream 3146 true chr7: 5694522-5697667 Medicago truncatula
Medtr7g417770 0.5kb upstream 0.5kb upstream 500 false chr7: 5697168-5697667 Medicago truncatula
Medtr7g417770 0.5kb downstream 0.5kb downstream 3146 true chr7: 5694022-5697167 Medicago truncatula
Medtr7g417770 0.5kb downstream 0.5kb downstream 500 false chr7: 5694022-5694521 Medicago truncatula
Medtr7g417770 1.0kb upstream 1.0kb upstream 3646 true chr7: 5694522-5698167 Medicago truncatula
Medtr7g417770 1.0kb upstream 1.0kb upstream 1000 false chr7: 5697168-5698167 Medicago truncatula
Medtr7g417770 1.0kb downstream 1.0kb downstream 3646 true chr7: 5693522-5697167 Medicago truncatula
Medtr7g417770 1.0kb downstream 1.0kb downstream 1000 false chr7: 5693522-5694521 Medicago truncatula
Medtr7g417770 2.0kb upstream 2.0kb upstream 4646 true chr7: 5694522-5699167 Medicago truncatula
Medtr7g417770 2.0kb upstream 2.0kb upstream 2000 false chr7: 5697168-5699167 Medicago truncatula
Medtr7g417770 2.0kb downstream 2.0kb downstream 4646 true chr7: 5692522-5697167 Medicago truncatula
Medtr7g417770 2.0kb downstream 2.0kb downstream 2000 false chr7: 5692522-5694521 Medicago truncatula
Medtr7g417770 5.0kb upstream 5.0kb upstream 7646 true chr7: 5694522-5702167 Medicago truncatula
Medtr7g417770 5.0kb upstream 5.0kb upstream 5000 false chr7: 5697168-5702167 Medicago truncatula
Medtr7g417770 5.0kb downstream 5.0kb downstream 7646 true chr7: 5689522-5697167 Medicago truncatula
Medtr7g417770 5.0kb downstream 5.0kb downstream 5000 false chr7: 5689522-5694521 Medicago truncatula
Medtr7g417770 10.0kb upstream 10.0kb upstream 12646 true chr7: 5694522-5707167 Medicago truncatula
Medtr7g417770 10.0kb upstream 10.0kb upstream 10000 false chr7: 5697168-5707167 Medicago truncatula
Medtr7g417770 10.0kb downstream 10.0kb downstream 12646 true chr7: 5684522-5697167 Medicago truncatula
Medtr7g417770 10.0kb downstream 10.0kb downstream 10000 false chr7: 5684522-5694521 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303266 5265 Fabidae View MSA
124063770 5270 Rosid View MSA
123736958 5271 Pentapetalae View MSA
122790433 5272 Eudicot View MSA
122047420 5273 Angiosperm View MSA
121310738 5274 Embryophyte View MSA
123348150 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain