Gene : Medtr7g451650 M. truncatula Mt4.0v1
Defline:  (1 of 27) PTHR23042//PTHR23042:SF57 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS Description:  basic helix loop helix protein BHLH17, putative
Genomic Order:  1843 Name:  ? Medtr7g451650
Secondary Identifier:  ? PAC:31083706
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g451650 0.5kb upstream 0.5kb upstream 4917 true chr7: 17487108-17492024 Medicago truncatula
Medtr7g451650 0.5kb upstream 0.5kb upstream 500 false chr7: 17491525-17492024 Medicago truncatula
Medtr7g451650 0.5kb downstream 0.5kb downstream 4917 true chr7: 17486608-17491524 Medicago truncatula
Medtr7g451650 0.5kb downstream 0.5kb downstream 500 false chr7: 17486608-17487107 Medicago truncatula
Medtr7g451650 1.0kb upstream 1.0kb upstream 5417 true chr7: 17487108-17492524 Medicago truncatula
Medtr7g451650 1.0kb upstream 1.0kb upstream 1000 false chr7: 17491525-17492524 Medicago truncatula
Medtr7g451650 1.0kb downstream 1.0kb downstream 5417 true chr7: 17486108-17491524 Medicago truncatula
Medtr7g451650 1.0kb downstream 1.0kb downstream 1000 false chr7: 17486108-17487107 Medicago truncatula
Medtr7g451650 2.0kb upstream 2.0kb upstream 6417 true chr7: 17487108-17493524 Medicago truncatula
Medtr7g451650 2.0kb upstream 2.0kb upstream 2000 false chr7: 17491525-17493524 Medicago truncatula
Medtr7g451650 2.0kb downstream 2.0kb downstream 6417 true chr7: 17485108-17491524 Medicago truncatula
Medtr7g451650 2.0kb downstream 2.0kb downstream 2000 false chr7: 17485108-17487107 Medicago truncatula
Medtr7g451650 5.0kb upstream 5.0kb upstream 9417 true chr7: 17487108-17496524 Medicago truncatula
Medtr7g451650 5.0kb upstream 5.0kb upstream 5000 false chr7: 17491525-17496524 Medicago truncatula
Medtr7g451650 5.0kb downstream 5.0kb downstream 9417 true chr7: 17482108-17491524 Medicago truncatula
Medtr7g451650 5.0kb downstream 5.0kb downstream 5000 false chr7: 17482108-17487107 Medicago truncatula
Medtr7g451650 10.0kb upstream 10.0kb upstream 14417 true chr7: 17487108-17501524 Medicago truncatula
Medtr7g451650 10.0kb upstream 10.0kb upstream 10000 false chr7: 17491525-17501524 Medicago truncatula
Medtr7g451650 10.0kb downstream 10.0kb downstream 14417 true chr7: 17477108-17491524 Medicago truncatula
Medtr7g451650 10.0kb downstream 10.0kb downstream 10000 false chr7: 17477108-17487107 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296367 5265 Fabidae View MSA
124051641 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.001     Low Low
cufflinks 0.003     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.004     Low  

0 Strain