Gene : Medtr8g007375 M. truncatula Mt4.0v1
Defline:  (1 of 10) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Description:  PPR containing plant-like protein
Genomic Order:  191 Name:  ? Medtr8g007375
Secondary Identifier:  ? PAC:31072718
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g007375 0.5kb upstream 0.5kb upstream 1724   true chr8: 1490614-1492337 Medicago truncatula
Medtr8g007375 0.5kb upstream 0.5kb upstream 500   false chr8: 1490614-1491113 Medicago truncatula
Medtr8g007375 0.5kb downstream 0.5kb downstream 1724   true chr8: 1491114-1492837 Medicago truncatula
Medtr8g007375 0.5kb downstream 0.5kb downstream 500   false chr8: 1492338-1492837 Medicago truncatula
Medtr8g007375 1.0kb upstream 1.0kb upstream 2224   true chr8: 1490114-1492337 Medicago truncatula
Medtr8g007375 1.0kb upstream 1.0kb upstream 1000   false chr8: 1490114-1491113 Medicago truncatula
Medtr8g007375 1.0kb downstream 1.0kb downstream 2224   true chr8: 1491114-1493337 Medicago truncatula
Medtr8g007375 1.0kb downstream 1.0kb downstream 1000   false chr8: 1492338-1493337 Medicago truncatula
Medtr8g007375 2.0kb upstream 2.0kb upstream 3224   true chr8: 1489114-1492337 Medicago truncatula
Medtr8g007375 2.0kb upstream 2.0kb upstream 2000   false chr8: 1489114-1491113 Medicago truncatula
Medtr8g007375 2.0kb downstream 2.0kb downstream 3224   true chr8: 1491114-1494337 Medicago truncatula
Medtr8g007375 2.0kb downstream 2.0kb downstream 2000   false chr8: 1492338-1494337 Medicago truncatula
Medtr8g007375 5.0kb upstream 5.0kb upstream 6224   true chr8: 1486114-1492337 Medicago truncatula
Medtr8g007375 5.0kb upstream 5.0kb upstream 5000   false chr8: 1486114-1491113 Medicago truncatula
Medtr8g007375 5.0kb downstream 5.0kb downstream 6224   true chr8: 1491114-1497337 Medicago truncatula
Medtr8g007375 5.0kb downstream 5.0kb downstream 5000   false chr8: 1492338-1497337 Medicago truncatula
Medtr8g007375 10.0kb upstream 10.0kb upstream 11224   true chr8: 1481114-1492337 Medicago truncatula
Medtr8g007375 10.0kb upstream 10.0kb upstream 10000   false chr8: 1481114-1491113 Medicago truncatula
Medtr8g007375 10.0kb downstream 10.0kb downstream 11224   true chr8: 1491114-1502337 Medicago truncatula
Medtr8g007375 10.0kb downstream 10.0kb downstream 10000   false chr8: 1492338-1502337 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304708 5265 Fabidae View MSA
124062625 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.55        
cufflinks 18.752     High  
cufflinks 18.642     High  
cufflinks 0.52       Low
cufflinks 40.547     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.86        
cufflinks 22.175     High  
cufflinks 0.603        

0 Strain