Gene : Medtr7g113170 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22939:SF95 - SERINE PROTEASE HTRA2, MITOCHONDRIAL Description:  trypsin-like serine protease
Genomic Order:  5822 Name:  ? Medtr7g113170
Secondary Identifier:  ? PAC:31081586
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g113170 0.5kb upstream 0.5kb upstream 5717 true chr7: 46584703-46590419 Medicago truncatula
Medtr7g113170 0.5kb upstream 0.5kb upstream 500 false chr7: 46584703-46585202 Medicago truncatula
Medtr7g113170 0.5kb downstream 0.5kb downstream 5717 true chr7: 46585203-46590919 Medicago truncatula
Medtr7g113170 0.5kb downstream 0.5kb downstream 500 false chr7: 46590420-46590919 Medicago truncatula
Medtr7g113170 1.0kb upstream 1.0kb upstream 6217 true chr7: 46584203-46590419 Medicago truncatula
Medtr7g113170 1.0kb upstream 1.0kb upstream 1000 false chr7: 46584203-46585202 Medicago truncatula
Medtr7g113170 1.0kb downstream 1.0kb downstream 6217 true chr7: 46585203-46591419 Medicago truncatula
Medtr7g113170 1.0kb downstream 1.0kb downstream 1000 false chr7: 46590420-46591419 Medicago truncatula
Medtr7g113170 2.0kb upstream 2.0kb upstream 7217 true chr7: 46583203-46590419 Medicago truncatula
Medtr7g113170 2.0kb upstream 2.0kb upstream 2000 false chr7: 46583203-46585202 Medicago truncatula
Medtr7g113170 2.0kb downstream 2.0kb downstream 7217 true chr7: 46585203-46592419 Medicago truncatula
Medtr7g113170 2.0kb downstream 2.0kb downstream 2000 false chr7: 46590420-46592419 Medicago truncatula
Medtr7g113170 5.0kb upstream 5.0kb upstream 10217 true chr7: 46580203-46590419 Medicago truncatula
Medtr7g113170 5.0kb upstream 5.0kb upstream 5000 false chr7: 46580203-46585202 Medicago truncatula
Medtr7g113170 5.0kb downstream 5.0kb downstream 10217 true chr7: 46585203-46595419 Medicago truncatula
Medtr7g113170 5.0kb downstream 5.0kb downstream 5000 false chr7: 46590420-46595419 Medicago truncatula
Medtr7g113170 10.0kb upstream 10.0kb upstream 15217 true chr7: 46575203-46590419 Medicago truncatula
Medtr7g113170 10.0kb upstream 10.0kb upstream 10000 false chr7: 46575203-46585202 Medicago truncatula
Medtr7g113170 10.0kb downstream 10.0kb downstream 15217 true chr7: 46585203-46600419 Medicago truncatula
Medtr7g113170 10.0kb downstream 10.0kb downstream 10000 false chr7: 46590420-46600419 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308433 5265 Fabidae View MSA
124065784 5270 Rosid View MSA
123744381 5271 Pentapetalae View MSA
122797059 5272 Eudicot View MSA
122045030 5273 Angiosperm View MSA
121344976 5274 Embryophyte View MSA
123424771 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.734       High
cufflinks 0.745        
cufflinks 0.935        
cufflinks 0.608        
cufflinks 1.276        
cufflinks 0.327       Low
cufflinks 0.655        
cufflinks 0.774        
cufflinks 0.909        

0 Strain