Gene : Medtr7g113420 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10992:SF773 - PROTEIN AUXIN RESPONSE 4 Description:  alpha/beta hydrolase family protein
Genomic Order:  5843 Name:  ? Medtr7g113420
Secondary Identifier:  ? PAC:31083334
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g113420 0.5kb upstream 0.5kb upstream 4401 true chr7: 46721006-46725406 Medicago truncatula
Medtr7g113420 0.5kb upstream 0.5kb upstream 500 false chr7: 46724907-46725406 Medicago truncatula
Medtr7g113420 0.5kb downstream 0.5kb downstream 4401 true chr7: 46720506-46724906 Medicago truncatula
Medtr7g113420 0.5kb downstream 0.5kb downstream 500 false chr7: 46720506-46721005 Medicago truncatula
Medtr7g113420 1.0kb upstream 1.0kb upstream 4901 true chr7: 46721006-46725906 Medicago truncatula
Medtr7g113420 1.0kb upstream 1.0kb upstream 1000 false chr7: 46724907-46725906 Medicago truncatula
Medtr7g113420 1.0kb downstream 1.0kb downstream 4901 true chr7: 46720006-46724906 Medicago truncatula
Medtr7g113420 1.0kb downstream 1.0kb downstream 1000 false chr7: 46720006-46721005 Medicago truncatula
Medtr7g113420 2.0kb upstream 2.0kb upstream 5901 true chr7: 46721006-46726906 Medicago truncatula
Medtr7g113420 2.0kb upstream 2.0kb upstream 2000 false chr7: 46724907-46726906 Medicago truncatula
Medtr7g113420 2.0kb downstream 2.0kb downstream 5901 true chr7: 46719006-46724906 Medicago truncatula
Medtr7g113420 2.0kb downstream 2.0kb downstream 2000 false chr7: 46719006-46721005 Medicago truncatula
Medtr7g113420 5.0kb upstream 5.0kb upstream 8901 true chr7: 46721006-46729906 Medicago truncatula
Medtr7g113420 5.0kb upstream 5.0kb upstream 5000 false chr7: 46724907-46729906 Medicago truncatula
Medtr7g113420 5.0kb downstream 5.0kb downstream 8901 true chr7: 46716006-46724906 Medicago truncatula
Medtr7g113420 5.0kb downstream 5.0kb downstream 5000 false chr7: 46716006-46721005 Medicago truncatula
Medtr7g113420 10.0kb upstream 10.0kb upstream 13901 true chr7: 46721006-46734906 Medicago truncatula
Medtr7g113420 10.0kb upstream 10.0kb upstream 10000 false chr7: 46724907-46734906 Medicago truncatula
Medtr7g113420 10.0kb downstream 10.0kb downstream 13901 true chr7: 46711006-46724906 Medicago truncatula
Medtr7g113420 10.0kb downstream 10.0kb downstream 10000 false chr7: 46711006-46721005 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300656 5265 Fabidae View MSA
124064720 5270 Rosid View MSA
123737240 5271 Pentapetalae View MSA
122791841 5272 Eudicot View MSA
122047835 5273 Angiosperm View MSA
121347873 5274 Embryophyte View MSA
123380660 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.448       Low
cufflinks 1.621        
cufflinks 2.17       High
cufflinks 0.425       Low
cufflinks 2.308       High
cufflinks 0.528        
cufflinks 0.649        
cufflinks 1.376        
cufflinks 1.282        

0 Strain