Gene : Medtr7g113408 M. truncatula Mt4.0v1
Defline:  (1 of 16) 1.13.11.12 - Linoleate 13S-lipoxygenase / Lipoxidase Description:  linoleate lipoxygenase
Genomic Order:  5841 Name:  ? Medtr7g113408
Secondary Identifier:  ? PAC:31082878
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5409 Medicago truncatula pathologic  
Mtruncatula PWY-5410 Medicago truncatula pathologic  
Mtruncatula PWY-735 Medicago truncatula pathologic  

Genomics

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Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g113408 0.5kb upstream 0.5kb upstream 785 true chr7: 46707862-46708646 Medicago truncatula
Medtr7g113408 0.5kb upstream 0.5kb upstream 500 false chr7: 46708147-46708646 Medicago truncatula
Medtr7g113408 0.5kb downstream 0.5kb downstream 785 true chr7: 46707362-46708146 Medicago truncatula
Medtr7g113408 0.5kb downstream 0.5kb downstream 500 false chr7: 46707362-46707861 Medicago truncatula
Medtr7g113408 1.0kb upstream 1.0kb upstream 1285 true chr7: 46707862-46709146 Medicago truncatula
Medtr7g113408 1.0kb upstream 1.0kb upstream 1000 false chr7: 46708147-46709146 Medicago truncatula
Medtr7g113408 1.0kb downstream 1.0kb downstream 1285 true chr7: 46706862-46708146 Medicago truncatula
Medtr7g113408 1.0kb downstream 1.0kb downstream 1000 false chr7: 46706862-46707861 Medicago truncatula
Medtr7g113408 2.0kb upstream 2.0kb upstream 2285 true chr7: 46707862-46710146 Medicago truncatula
Medtr7g113408 2.0kb upstream 2.0kb upstream 2000 false chr7: 46708147-46710146 Medicago truncatula
Medtr7g113408 2.0kb downstream 2.0kb downstream 2285 true chr7: 46705862-46708146 Medicago truncatula
Medtr7g113408 2.0kb downstream 2.0kb downstream 2000 false chr7: 46705862-46707861 Medicago truncatula
Medtr7g113408 5.0kb upstream 5.0kb upstream 5285 true chr7: 46707862-46713146 Medicago truncatula
Medtr7g113408 5.0kb upstream 5.0kb upstream 5000 false chr7: 46708147-46713146 Medicago truncatula
Medtr7g113408 5.0kb downstream 5.0kb downstream 5285 true chr7: 46702862-46708146 Medicago truncatula
Medtr7g113408 5.0kb downstream 5.0kb downstream 5000 false chr7: 46702862-46707861 Medicago truncatula
Medtr7g113408 10.0kb upstream 10.0kb upstream 10285 true chr7: 46707862-46718146 Medicago truncatula
Medtr7g113408 10.0kb upstream 10.0kb upstream 10000 false chr7: 46708147-46718146 Medicago truncatula
Medtr7g113408 10.0kb downstream 10.0kb downstream 10285 true chr7: 46697862-46708146 Medicago truncatula
Medtr7g113408 10.0kb downstream 10.0kb downstream 10000 false chr7: 46697862-46707861 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122267855 5265 Fabidae Singleton cluster - no MSA
124008757 5270 Rosid Singleton cluster - no MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.075        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain