Gene : Medtr7g114940 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12143 - PEPTIDE N-GLYCANASE PNGASE -RELATED Description:  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
Genomic Order:  5963 Name:  ? Medtr7g114940
Secondary Identifier:  ? PAC:31081636
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g114940 0.5kb upstream 0.5kb upstream 7599 true chr7: 47445092-47452690 Medicago truncatula
Medtr7g114940 0.5kb upstream 0.5kb upstream 500 false chr7: 47452191-47452690 Medicago truncatula
Medtr7g114940 0.5kb downstream 0.5kb downstream 7599 true chr7: 47444592-47452190 Medicago truncatula
Medtr7g114940 0.5kb downstream 0.5kb downstream 500 false chr7: 47444592-47445091 Medicago truncatula
Medtr7g114940 1.0kb upstream 1.0kb upstream 8099 true chr7: 47445092-47453190 Medicago truncatula
Medtr7g114940 1.0kb upstream 1.0kb upstream 1000 false chr7: 47452191-47453190 Medicago truncatula
Medtr7g114940 1.0kb downstream 1.0kb downstream 8099 true chr7: 47444092-47452190 Medicago truncatula
Medtr7g114940 1.0kb downstream 1.0kb downstream 1000 false chr7: 47444092-47445091 Medicago truncatula
Medtr7g114940 2.0kb upstream 2.0kb upstream 9099 true chr7: 47445092-47454190 Medicago truncatula
Medtr7g114940 2.0kb upstream 2.0kb upstream 2000 false chr7: 47452191-47454190 Medicago truncatula
Medtr7g114940 2.0kb downstream 2.0kb downstream 9099 true chr7: 47443092-47452190 Medicago truncatula
Medtr7g114940 2.0kb downstream 2.0kb downstream 2000 false chr7: 47443092-47445091 Medicago truncatula
Medtr7g114940 5.0kb upstream 5.0kb upstream 12099 true chr7: 47445092-47457190 Medicago truncatula
Medtr7g114940 5.0kb upstream 5.0kb upstream 5000 false chr7: 47452191-47457190 Medicago truncatula
Medtr7g114940 5.0kb downstream 5.0kb downstream 12099 true chr7: 47440092-47452190 Medicago truncatula
Medtr7g114940 5.0kb downstream 5.0kb downstream 5000 false chr7: 47440092-47445091 Medicago truncatula
Medtr7g114940 10.0kb upstream 10.0kb upstream 17099 true chr7: 47445092-47462190 Medicago truncatula
Medtr7g114940 10.0kb upstream 10.0kb upstream 10000 false chr7: 47452191-47462190 Medicago truncatula
Medtr7g114940 10.0kb downstream 10.0kb downstream 17099 true chr7: 47435092-47452190 Medicago truncatula
Medtr7g114940 10.0kb downstream 10.0kb downstream 10000 false chr7: 47435092-47445091 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302619 5265 Fabidae View MSA
124067325 5270 Rosid View MSA
123748709 5271 Pentapetalae View MSA
122792464 5272 Eudicot View MSA
122051116 5273 Angiosperm View MSA
121344308 5274 Embryophyte View MSA
123425533 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.455       High
cufflinks 6.338        
cufflinks 4.985        
cufflinks 2.438       Low
cufflinks 4.513        
cufflinks 2.71       Low
cufflinks 5.639        
cufflinks 4.668        
cufflinks 5.573        

0 Strain