Gene : Medtr7g114750 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF02502//PF07883 - Ribose/Galactose Isomerase (LacAB_rpiB) // Cupin domain (Cupin_2) Description:  DNA-damage-repair/toleration protein DRT102, putative
Genomic Order:  5947 Name:  ? Medtr7g114750
Secondary Identifier:  ? PAC:31081343
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CALVIN-PWY Medicago truncatula pathologic  
Mtruncatula NONOXIPENT-PWY Medicago truncatula pathologic  
Mtruncatula PENTOSE-P-PWY Medicago truncatula pathologic  
Mtruncatula PHOTOALL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5723 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g114750 0.5kb upstream 0.5kb upstream 2365 true chr7: 47376604-47378968 Medicago truncatula
Medtr7g114750 0.5kb upstream 0.5kb upstream 500 false chr7: 47378469-47378968 Medicago truncatula
Medtr7g114750 0.5kb downstream 0.5kb downstream 2365 true chr7: 47376104-47378468 Medicago truncatula
Medtr7g114750 0.5kb downstream 0.5kb downstream 500 false chr7: 47376104-47376603 Medicago truncatula
Medtr7g114750 1.0kb upstream 1.0kb upstream 2865 true chr7: 47376604-47379468 Medicago truncatula
Medtr7g114750 1.0kb upstream 1.0kb upstream 1000 false chr7: 47378469-47379468 Medicago truncatula
Medtr7g114750 1.0kb downstream 1.0kb downstream 2865 true chr7: 47375604-47378468 Medicago truncatula
Medtr7g114750 1.0kb downstream 1.0kb downstream 1000 false chr7: 47375604-47376603 Medicago truncatula
Medtr7g114750 2.0kb upstream 2.0kb upstream 3865 true chr7: 47376604-47380468 Medicago truncatula
Medtr7g114750 2.0kb upstream 2.0kb upstream 2000 false chr7: 47378469-47380468 Medicago truncatula
Medtr7g114750 2.0kb downstream 2.0kb downstream 3865 true chr7: 47374604-47378468 Medicago truncatula
Medtr7g114750 2.0kb downstream 2.0kb downstream 2000 false chr7: 47374604-47376603 Medicago truncatula
Medtr7g114750 5.0kb upstream 5.0kb upstream 6865 true chr7: 47376604-47383468 Medicago truncatula
Medtr7g114750 5.0kb upstream 5.0kb upstream 5000 false chr7: 47378469-47383468 Medicago truncatula
Medtr7g114750 5.0kb downstream 5.0kb downstream 6865 true chr7: 47371604-47378468 Medicago truncatula
Medtr7g114750 5.0kb downstream 5.0kb downstream 5000 false chr7: 47371604-47376603 Medicago truncatula
Medtr7g114750 10.0kb upstream 10.0kb upstream 11865 true chr7: 47376604-47388468 Medicago truncatula
Medtr7g114750 10.0kb upstream 10.0kb upstream 10000 false chr7: 47378469-47388468 Medicago truncatula
Medtr7g114750 10.0kb downstream 10.0kb downstream 11865 true chr7: 47366604-47378468 Medicago truncatula
Medtr7g114750 10.0kb downstream 10.0kb downstream 10000 false chr7: 47366604-47376603 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303200 5265 Fabidae View MSA
124062390 5270 Rosid View MSA
123736544 5271 Pentapetalae View MSA
122789174 5272 Eudicot View MSA
122042906 5273 Angiosperm View MSA
121349668 5274 Embryophyte View MSA
123381392 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.293       Low
cufflinks 1.13        
cufflinks 0.798        
cufflinks 0.919        
cufflinks 1.525       High
cufflinks 0.236       Low
cufflinks 0.379        
cufflinks 0.565        
cufflinks 1.177        

0 Strain