Gene : Medtr7g115220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00187//PF00967 - Chitin recognition protein (Chitin_bind_1) // Barwin family (Barwin) Description:  Chitinase / Hevein / PR-4 / Wheatwin2
Genomic Order:  5982 Name:  ? Medtr7g115220
Secondary Identifier:  ? PAC:31081207
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g115220 0.5kb upstream 0.5kb upstream 1742 true chr7: 47582460-47584201 Medicago truncatula
Medtr7g115220 0.5kb upstream 0.5kb upstream 500 false chr7: 47582460-47582959 Medicago truncatula
Medtr7g115220 0.5kb downstream 0.5kb downstream 1742 true chr7: 47582960-47584701 Medicago truncatula
Medtr7g115220 0.5kb downstream 0.5kb downstream 500 false chr7: 47584202-47584701 Medicago truncatula
Medtr7g115220 1.0kb upstream 1.0kb upstream 2242 true chr7: 47581960-47584201 Medicago truncatula
Medtr7g115220 1.0kb upstream 1.0kb upstream 1000 false chr7: 47581960-47582959 Medicago truncatula
Medtr7g115220 1.0kb downstream 1.0kb downstream 2242 true chr7: 47582960-47585201 Medicago truncatula
Medtr7g115220 1.0kb downstream 1.0kb downstream 1000 false chr7: 47584202-47585201 Medicago truncatula
Medtr7g115220 2.0kb upstream 2.0kb upstream 3242 true chr7: 47580960-47584201 Medicago truncatula
Medtr7g115220 2.0kb upstream 2.0kb upstream 2000 false chr7: 47580960-47582959 Medicago truncatula
Medtr7g115220 2.0kb downstream 2.0kb downstream 3242 true chr7: 47582960-47586201 Medicago truncatula
Medtr7g115220 2.0kb downstream 2.0kb downstream 2000 false chr7: 47584202-47586201 Medicago truncatula
Medtr7g115220 5.0kb upstream 5.0kb upstream 6242 true chr7: 47577960-47584201 Medicago truncatula
Medtr7g115220 5.0kb upstream 5.0kb upstream 5000 false chr7: 47577960-47582959 Medicago truncatula
Medtr7g115220 5.0kb downstream 5.0kb downstream 6242 true chr7: 47582960-47589201 Medicago truncatula
Medtr7g115220 5.0kb downstream 5.0kb downstream 5000 false chr7: 47584202-47589201 Medicago truncatula
Medtr7g115220 10.0kb upstream 10.0kb upstream 11242 true chr7: 47572960-47584201 Medicago truncatula
Medtr7g115220 10.0kb upstream 10.0kb upstream 10000 false chr7: 47572960-47582959 Medicago truncatula
Medtr7g115220 10.0kb downstream 10.0kb downstream 11242 true chr7: 47582960-47594201 Medicago truncatula
Medtr7g115220 10.0kb downstream 10.0kb downstream 10000 false chr7: 47584202-47594201 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311692 5265 Fabidae View MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.2     High Low
cufflinks 44.188     High  
cufflinks 34.271     High  
cufflinks 401.872     High High
cufflinks 39.338     High  
cufflinks 504.536     High High
cufflinks 299.974     High High
cufflinks 48.896     High  
cufflinks 92.634     High  

0 Strain