Gene : Medtr7g116350 M. truncatula Mt4.0v1
Defline:  (1 of 1) 3.2.1.14//3.2.1.17 - Chitinase / Poly-beta-glucosaminidase // Lysozyme / Muramidase Description:  class III chitinase
Genomic Order:  6041 Name:  ? Medtr7g116350
Secondary Identifier:  ? PAC:31079966
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6902 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g116350 0.5kb upstream 0.5kb upstream 6105 true chr7: 47979288-47985392 Medicago truncatula
Medtr7g116350 0.5kb upstream 0.5kb upstream 500 false chr7: 47979288-47979787 Medicago truncatula
Medtr7g116350 0.5kb downstream 0.5kb downstream 6105 true chr7: 47979788-47985892 Medicago truncatula
Medtr7g116350 0.5kb downstream 0.5kb downstream 500 false chr7: 47985393-47985892 Medicago truncatula
Medtr7g116350 1.0kb upstream 1.0kb upstream 6605 true chr7: 47978788-47985392 Medicago truncatula
Medtr7g116350 1.0kb upstream 1.0kb upstream 1000 false chr7: 47978788-47979787 Medicago truncatula
Medtr7g116350 1.0kb downstream 1.0kb downstream 6605 true chr7: 47979788-47986392 Medicago truncatula
Medtr7g116350 1.0kb downstream 1.0kb downstream 1000 false chr7: 47985393-47986392 Medicago truncatula
Medtr7g116350 2.0kb upstream 2.0kb upstream 7605 true chr7: 47977788-47985392 Medicago truncatula
Medtr7g116350 2.0kb upstream 2.0kb upstream 2000 false chr7: 47977788-47979787 Medicago truncatula
Medtr7g116350 2.0kb downstream 2.0kb downstream 7605 true chr7: 47979788-47987392 Medicago truncatula
Medtr7g116350 2.0kb downstream 2.0kb downstream 2000 false chr7: 47985393-47987392 Medicago truncatula
Medtr7g116350 5.0kb upstream 5.0kb upstream 10605 true chr7: 47974788-47985392 Medicago truncatula
Medtr7g116350 5.0kb upstream 5.0kb upstream 5000 false chr7: 47974788-47979787 Medicago truncatula
Medtr7g116350 5.0kb downstream 5.0kb downstream 10605 true chr7: 47979788-47990392 Medicago truncatula
Medtr7g116350 5.0kb downstream 5.0kb downstream 5000 false chr7: 47985393-47990392 Medicago truncatula
Medtr7g116350 10.0kb upstream 10.0kb upstream 15605 true chr7: 47969788-47985392 Medicago truncatula
Medtr7g116350 10.0kb upstream 10.0kb upstream 10000 false chr7: 47969788-47979787 Medicago truncatula
Medtr7g116350 10.0kb downstream 10.0kb downstream 15605 true chr7: 47979788-47995392 Medicago truncatula
Medtr7g116350 10.0kb downstream 10.0kb downstream 10000 false chr7: 47985393-47995392 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303313 5265 Fabidae View MSA
124061147 5270 Rosid View MSA
123738184 5271 Pentapetalae View MSA
122791371 5272 Eudicot View MSA
122048917 5273 Angiosperm View MSA
121311170 5274 Embryophyte View MSA
123348503 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.411        
cufflinks 0.22        
cufflinks 0.421        
cufflinks 0.012     Low Low
cufflinks 0.635        
cufflinks 0.011     Low Low
cufflinks 0.277        
cufflinks 0.255        
cufflinks 0.184        

0 Strain