Gene : Medtr7g115670 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33372:SF1 - CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Description:  heat shock protein-binding protein
Genomic Order:  6014 Name:  ? Medtr7g115670
Secondary Identifier:  ? PAC:31080850
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g115670 0.5kb upstream 0.5kb upstream 4226 true chr7: 47818120-47822345 Medicago truncatula
Medtr7g115670 0.5kb upstream 0.5kb upstream 500 false chr7: 47818120-47818619 Medicago truncatula
Medtr7g115670 0.5kb downstream 0.5kb downstream 4226 true chr7: 47818620-47822845 Medicago truncatula
Medtr7g115670 0.5kb downstream 0.5kb downstream 500 false chr7: 47822346-47822845 Medicago truncatula
Medtr7g115670 1.0kb upstream 1.0kb upstream 4726 true chr7: 47817620-47822345 Medicago truncatula
Medtr7g115670 1.0kb upstream 1.0kb upstream 1000 false chr7: 47817620-47818619 Medicago truncatula
Medtr7g115670 1.0kb downstream 1.0kb downstream 4726 true chr7: 47818620-47823345 Medicago truncatula
Medtr7g115670 1.0kb downstream 1.0kb downstream 1000 false chr7: 47822346-47823345 Medicago truncatula
Medtr7g115670 2.0kb upstream 2.0kb upstream 5726 true chr7: 47816620-47822345 Medicago truncatula
Medtr7g115670 2.0kb upstream 2.0kb upstream 2000 false chr7: 47816620-47818619 Medicago truncatula
Medtr7g115670 2.0kb downstream 2.0kb downstream 5726 true chr7: 47818620-47824345 Medicago truncatula
Medtr7g115670 2.0kb downstream 2.0kb downstream 2000 false chr7: 47822346-47824345 Medicago truncatula
Medtr7g115670 5.0kb upstream 5.0kb upstream 8726 true chr7: 47813620-47822345 Medicago truncatula
Medtr7g115670 5.0kb upstream 5.0kb upstream 5000 false chr7: 47813620-47818619 Medicago truncatula
Medtr7g115670 5.0kb downstream 5.0kb downstream 8726 true chr7: 47818620-47827345 Medicago truncatula
Medtr7g115670 5.0kb downstream 5.0kb downstream 5000 false chr7: 47822346-47827345 Medicago truncatula
Medtr7g115670 10.0kb upstream 10.0kb upstream 13726 true chr7: 47808620-47822345 Medicago truncatula
Medtr7g115670 10.0kb upstream 10.0kb upstream 10000 false chr7: 47808620-47818619 Medicago truncatula
Medtr7g115670 10.0kb downstream 10.0kb downstream 13726 true chr7: 47818620-47832345 Medicago truncatula
Medtr7g115670 10.0kb downstream 10.0kb downstream 10000 false chr7: 47822346-47832345 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308195 5265 Fabidae View MSA
124063539 5270 Rosid View MSA
123738014 5271 Pentapetalae View MSA
122791822 5272 Eudicot View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.912        
cufflinks 8.027        
cufflinks 11.339     High High
cufflinks 3.059        
cufflinks 10.193       High
cufflinks 1.057       Low
cufflinks 2.613        
cufflinks 9.544     High  
cufflinks 2.045        

0 Strain