Gene : Medtr7g116590 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12195 - P53 INDUCIBLE PROTEIN-RELATED Description:  transcription activators protein
Genomic Order:  6059 Name:  ? Medtr7g116590
Secondary Identifier:  ? PAC:31082340
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g116590 0.5kb upstream 0.5kb upstream 21821 true chr7: 48110618-48132438 Medicago truncatula
Medtr7g116590 0.5kb upstream 0.5kb upstream 500 false chr7: 48131939-48132438 Medicago truncatula
Medtr7g116590 0.5kb downstream 0.5kb downstream 21821 true chr7: 48110118-48131938 Medicago truncatula
Medtr7g116590 0.5kb downstream 0.5kb downstream 500 false chr7: 48110118-48110617 Medicago truncatula
Medtr7g116590 1.0kb upstream 1.0kb upstream 22321 true chr7: 48110618-48132938 Medicago truncatula
Medtr7g116590 1.0kb upstream 1.0kb upstream 1000 false chr7: 48131939-48132938 Medicago truncatula
Medtr7g116590 1.0kb downstream 1.0kb downstream 22321 true chr7: 48109618-48131938 Medicago truncatula
Medtr7g116590 1.0kb downstream 1.0kb downstream 1000 false chr7: 48109618-48110617 Medicago truncatula
Medtr7g116590 2.0kb upstream 2.0kb upstream 23321 true chr7: 48110618-48133938 Medicago truncatula
Medtr7g116590 2.0kb upstream 2.0kb upstream 2000 false chr7: 48131939-48133938 Medicago truncatula
Medtr7g116590 2.0kb downstream 2.0kb downstream 23321 true chr7: 48108618-48131938 Medicago truncatula
Medtr7g116590 2.0kb downstream 2.0kb downstream 2000 false chr7: 48108618-48110617 Medicago truncatula
Medtr7g116590 5.0kb upstream 5.0kb upstream 26321 true chr7: 48110618-48136938 Medicago truncatula
Medtr7g116590 5.0kb upstream 5.0kb upstream 5000 false chr7: 48131939-48136938 Medicago truncatula
Medtr7g116590 5.0kb downstream 5.0kb downstream 26321 true chr7: 48105618-48131938 Medicago truncatula
Medtr7g116590 5.0kb downstream 5.0kb downstream 5000 false chr7: 48105618-48110617 Medicago truncatula
Medtr7g116590 10.0kb upstream 10.0kb upstream 31321 true chr7: 48110618-48141938 Medicago truncatula
Medtr7g116590 10.0kb upstream 10.0kb upstream 10000 false chr7: 48131939-48141938 Medicago truncatula
Medtr7g116590 10.0kb downstream 10.0kb downstream 31321 true chr7: 48100618-48131938 Medicago truncatula
Medtr7g116590 10.0kb downstream 10.0kb downstream 10000 false chr7: 48100618-48110617 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047332 5273 Angiosperm View MSA
122300550 5265 Fabidae View MSA
124065928 5270 Rosid View MSA
123737090 5271 Pentapetalae View MSA
122792740 5272 Eudicot View MSA
121351207 5274 Embryophyte View MSA
123426816 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.978        
cufflinks 3.296        
cufflinks 1.842        
cufflinks 1.088       Low
cufflinks 2.911        
cufflinks 0.609       Low
cufflinks 2.084        
cufflinks 2.648        
cufflinks 2.201        

0 Strain