Gene : Medtr7g108180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13169//PTHR13169:SF5 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN Description:  membrane-anchored ubiquitin-fold protein 4 precursor
Genomic Order:  5455 Name:  ? Medtr7g108180
Secondary Identifier:  ? PAC:31079624
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g108180 0.5kb upstream 0.5kb upstream 2601 true chr7: 43992408-43995008 Medicago truncatula
Medtr7g108180 0.5kb upstream 0.5kb upstream 500 false chr7: 43994509-43995008 Medicago truncatula
Medtr7g108180 0.5kb downstream 0.5kb downstream 2601 true chr7: 43991908-43994508 Medicago truncatula
Medtr7g108180 0.5kb downstream 0.5kb downstream 500 false chr7: 43991908-43992407 Medicago truncatula
Medtr7g108180 1.0kb upstream 1.0kb upstream 3101 true chr7: 43992408-43995508 Medicago truncatula
Medtr7g108180 1.0kb upstream 1.0kb upstream 1000 false chr7: 43994509-43995508 Medicago truncatula
Medtr7g108180 1.0kb downstream 1.0kb downstream 3101 true chr7: 43991408-43994508 Medicago truncatula
Medtr7g108180 1.0kb downstream 1.0kb downstream 1000 false chr7: 43991408-43992407 Medicago truncatula
Medtr7g108180 2.0kb upstream 2.0kb upstream 4101 true chr7: 43992408-43996508 Medicago truncatula
Medtr7g108180 2.0kb upstream 2.0kb upstream 2000 false chr7: 43994509-43996508 Medicago truncatula
Medtr7g108180 2.0kb downstream 2.0kb downstream 4101 true chr7: 43990408-43994508 Medicago truncatula
Medtr7g108180 2.0kb downstream 2.0kb downstream 2000 false chr7: 43990408-43992407 Medicago truncatula
Medtr7g108180 5.0kb upstream 5.0kb upstream 7101 true chr7: 43992408-43999508 Medicago truncatula
Medtr7g108180 5.0kb upstream 5.0kb upstream 5000 false chr7: 43994509-43999508 Medicago truncatula
Medtr7g108180 5.0kb downstream 5.0kb downstream 7101 true chr7: 43987408-43994508 Medicago truncatula
Medtr7g108180 5.0kb downstream 5.0kb downstream 5000 false chr7: 43987408-43992407 Medicago truncatula
Medtr7g108180 10.0kb upstream 10.0kb upstream 12101 true chr7: 43992408-44004508 Medicago truncatula
Medtr7g108180 10.0kb upstream 10.0kb upstream 10000 false chr7: 43994509-44004508 Medicago truncatula
Medtr7g108180 10.0kb downstream 10.0kb downstream 12101 true chr7: 43982408-43994508 Medicago truncatula
Medtr7g108180 10.0kb downstream 10.0kb downstream 10000 false chr7: 43982408-43992407 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299177 5265 Fabidae View MSA
124069893 5270 Rosid View MSA
123744059 5271 Pentapetalae View MSA
122795764 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.941        
cufflinks 3.433        
cufflinks 4.473       High
cufflinks 2.023        
cufflinks 3.837        
cufflinks 0.481       Low
cufflinks 2.552        
cufflinks 3.292        
cufflinks 1.488        

0 Strain