Gene : Medtr7g107640 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31148:SF1 - U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C Description:  U1 small nuclear C-like ribonucleoprotein
Genomic Order:  5441 Name:  ? Medtr7g107640
Secondary Identifier:  ? PAC:31079756
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g107640 0.5kb upstream 0.5kb upstream 3032 true chr7: 43909800-43912831 Medicago truncatula
Medtr7g107640 0.5kb upstream 0.5kb upstream 500 false chr7: 43909800-43910299 Medicago truncatula
Medtr7g107640 0.5kb downstream 0.5kb downstream 3032 true chr7: 43910300-43913331 Medicago truncatula
Medtr7g107640 0.5kb downstream 0.5kb downstream 500 false chr7: 43912832-43913331 Medicago truncatula
Medtr7g107640 1.0kb upstream 1.0kb upstream 3532 true chr7: 43909300-43912831 Medicago truncatula
Medtr7g107640 1.0kb upstream 1.0kb upstream 1000 false chr7: 43909300-43910299 Medicago truncatula
Medtr7g107640 1.0kb downstream 1.0kb downstream 3532 true chr7: 43910300-43913831 Medicago truncatula
Medtr7g107640 1.0kb downstream 1.0kb downstream 1000 false chr7: 43912832-43913831 Medicago truncatula
Medtr7g107640 2.0kb upstream 2.0kb upstream 4532 true chr7: 43908300-43912831 Medicago truncatula
Medtr7g107640 2.0kb upstream 2.0kb upstream 2000 false chr7: 43908300-43910299 Medicago truncatula
Medtr7g107640 2.0kb downstream 2.0kb downstream 4532 true chr7: 43910300-43914831 Medicago truncatula
Medtr7g107640 2.0kb downstream 2.0kb downstream 2000 false chr7: 43912832-43914831 Medicago truncatula
Medtr7g107640 5.0kb upstream 5.0kb upstream 7532 true chr7: 43905300-43912831 Medicago truncatula
Medtr7g107640 5.0kb upstream 5.0kb upstream 5000 false chr7: 43905300-43910299 Medicago truncatula
Medtr7g107640 5.0kb downstream 5.0kb downstream 7532 true chr7: 43910300-43917831 Medicago truncatula
Medtr7g107640 5.0kb downstream 5.0kb downstream 5000 false chr7: 43912832-43917831 Medicago truncatula
Medtr7g107640 10.0kb upstream 10.0kb upstream 12532 true chr7: 43900300-43912831 Medicago truncatula
Medtr7g107640 10.0kb upstream 10.0kb upstream 10000 false chr7: 43900300-43910299 Medicago truncatula
Medtr7g107640 10.0kb downstream 10.0kb downstream 12532 true chr7: 43910300-43922831 Medicago truncatula
Medtr7g107640 10.0kb downstream 10.0kb downstream 10000 false chr7: 43912832-43922831 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303068 5265 Fabidae View MSA
124069349 5270 Rosid View MSA
123747272 5271 Pentapetalae View MSA
122794808 5272 Eudicot View MSA
122048788 5273 Angiosperm View MSA
121348287 5274 Embryophyte View MSA
123425878 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.314        
cufflinks 4.356        
cufflinks 4.234        
cufflinks 10.672     High High
cufflinks 5.218        
cufflinks 7.091        
cufflinks 4.834        
cufflinks 4.032        
cufflinks 7.495        

0 Strain