Gene : Medtr7g108680 M. truncatula Mt4.0v1
Defline:  (1 of 3) 2.7.6.2 - Thiamine diphosphokinase / Thiamine pyrophosphokinase Description:  thiaminepyrophosphokinase
Genomic Order:  5497 Name:  ? Medtr7g108680
Secondary Identifier:  ? PAC:31082129
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6908 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g108680 0.5kb upstream 0.5kb upstream 4781 true chr7: 44272144-44276924 Medicago truncatula
Medtr7g108680 0.5kb upstream 0.5kb upstream 500 false chr7: 44272144-44272643 Medicago truncatula
Medtr7g108680 0.5kb downstream 0.5kb downstream 4781 true chr7: 44272644-44277424 Medicago truncatula
Medtr7g108680 0.5kb downstream 0.5kb downstream 500 false chr7: 44276925-44277424 Medicago truncatula
Medtr7g108680 1.0kb upstream 1.0kb upstream 5281 true chr7: 44271644-44276924 Medicago truncatula
Medtr7g108680 1.0kb upstream 1.0kb upstream 1000 false chr7: 44271644-44272643 Medicago truncatula
Medtr7g108680 1.0kb downstream 1.0kb downstream 5281 true chr7: 44272644-44277924 Medicago truncatula
Medtr7g108680 1.0kb downstream 1.0kb downstream 1000 false chr7: 44276925-44277924 Medicago truncatula
Medtr7g108680 2.0kb upstream 2.0kb upstream 6281 true chr7: 44270644-44276924 Medicago truncatula
Medtr7g108680 2.0kb upstream 2.0kb upstream 2000 false chr7: 44270644-44272643 Medicago truncatula
Medtr7g108680 2.0kb downstream 2.0kb downstream 6281 true chr7: 44272644-44278924 Medicago truncatula
Medtr7g108680 2.0kb downstream 2.0kb downstream 2000 false chr7: 44276925-44278924 Medicago truncatula
Medtr7g108680 5.0kb upstream 5.0kb upstream 9281 true chr7: 44267644-44276924 Medicago truncatula
Medtr7g108680 5.0kb upstream 5.0kb upstream 5000 false chr7: 44267644-44272643 Medicago truncatula
Medtr7g108680 5.0kb downstream 5.0kb downstream 9281 true chr7: 44272644-44281924 Medicago truncatula
Medtr7g108680 5.0kb downstream 5.0kb downstream 5000 false chr7: 44276925-44281924 Medicago truncatula
Medtr7g108680 10.0kb upstream 10.0kb upstream 14281 true chr7: 44262644-44276924 Medicago truncatula
Medtr7g108680 10.0kb upstream 10.0kb upstream 10000 false chr7: 44262644-44272643 Medicago truncatula
Medtr7g108680 10.0kb downstream 10.0kb downstream 14281 true chr7: 44272644-44286924 Medicago truncatula
Medtr7g108680 10.0kb downstream 10.0kb downstream 10000 false chr7: 44276925-44286924 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303859 5265 Fabidae View MSA
124064421 5270 Rosid View MSA
123740086 5271 Pentapetalae View MSA
122769969 5272 Eudicot View MSA
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.709       High
cufflinks 2.037        
cufflinks 2.937        
cufflinks 7.415       High
cufflinks 1.157       Low
cufflinks 5.355        
cufflinks 6.303        
cufflinks 2.152        
cufflinks 4.332        

0 Strain