Gene : Medtr7g108540 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.7.1.24 - Dephospho-CoA kinase / Dephosphocoenzyme A kinase Description:  dephospho-CoA kinase
Genomic Order:  5485 Name:  ? Medtr7g108540
Secondary Identifier:  ? PAC:31082525
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula COA-PWY Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g108540 0.5kb upstream 0.5kb upstream 3657 true chr7: 44215599-44219255 Medicago truncatula
Medtr7g108540 0.5kb upstream 0.5kb upstream 500 false chr7: 44215599-44216098 Medicago truncatula
Medtr7g108540 0.5kb downstream 0.5kb downstream 3657 true chr7: 44216099-44219755 Medicago truncatula
Medtr7g108540 0.5kb downstream 0.5kb downstream 500 false chr7: 44219256-44219755 Medicago truncatula
Medtr7g108540 1.0kb upstream 1.0kb upstream 4157 true chr7: 44215099-44219255 Medicago truncatula
Medtr7g108540 1.0kb upstream 1.0kb upstream 1000 false chr7: 44215099-44216098 Medicago truncatula
Medtr7g108540 1.0kb downstream 1.0kb downstream 4157 true chr7: 44216099-44220255 Medicago truncatula
Medtr7g108540 1.0kb downstream 1.0kb downstream 1000 false chr7: 44219256-44220255 Medicago truncatula
Medtr7g108540 2.0kb upstream 2.0kb upstream 5157 true chr7: 44214099-44219255 Medicago truncatula
Medtr7g108540 2.0kb upstream 2.0kb upstream 2000 false chr7: 44214099-44216098 Medicago truncatula
Medtr7g108540 2.0kb downstream 2.0kb downstream 5157 true chr7: 44216099-44221255 Medicago truncatula
Medtr7g108540 2.0kb downstream 2.0kb downstream 2000 false chr7: 44219256-44221255 Medicago truncatula
Medtr7g108540 5.0kb upstream 5.0kb upstream 8157 true chr7: 44211099-44219255 Medicago truncatula
Medtr7g108540 5.0kb upstream 5.0kb upstream 5000 false chr7: 44211099-44216098 Medicago truncatula
Medtr7g108540 5.0kb downstream 5.0kb downstream 8157 true chr7: 44216099-44224255 Medicago truncatula
Medtr7g108540 5.0kb downstream 5.0kb downstream 5000 false chr7: 44219256-44224255 Medicago truncatula
Medtr7g108540 10.0kb upstream 10.0kb upstream 13157 true chr7: 44206099-44219255 Medicago truncatula
Medtr7g108540 10.0kb upstream 10.0kb upstream 10000 false chr7: 44206099-44216098 Medicago truncatula
Medtr7g108540 10.0kb downstream 10.0kb downstream 13157 true chr7: 44216099-44229255 Medicago truncatula
Medtr7g108540 10.0kb downstream 10.0kb downstream 10000 false chr7: 44219256-44229255 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308443 5265 Fabidae View MSA
124066119 5270 Rosid View MSA
123752768 5271 Pentapetalae View MSA
122789593 5272 Eudicot View MSA
122046896 5273 Angiosperm View MSA
121344880 5274 Embryophyte View MSA
123424724 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.817       Low
cufflinks 3.809        
cufflinks 6.454       High
cufflinks 4.044        
cufflinks 4.143        
cufflinks 3.7        
cufflinks 3.389        
cufflinks 4.687        
cufflinks 2.803       Low

0 Strain