Gene : Medtr7g108530 M. truncatula Mt4.0v1
Defline:  (1 of 43) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Description:  PPR containing plant-like protein
Genomic Order:  5483 Name:  ? Medtr7g108530
Secondary Identifier:  ? PAC:31082538
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g108530 0.5kb upstream 0.5kb upstream 2467 true chr7: 44210679-44213145 Medicago truncatula
Medtr7g108530 0.5kb upstream 0.5kb upstream 500 false chr7: 44212646-44213145 Medicago truncatula
Medtr7g108530 0.5kb downstream 0.5kb downstream 2467 true chr7: 44210179-44212645 Medicago truncatula
Medtr7g108530 0.5kb downstream 0.5kb downstream 500 false chr7: 44210179-44210678 Medicago truncatula
Medtr7g108530 1.0kb upstream 1.0kb upstream 2967 true chr7: 44210679-44213645 Medicago truncatula
Medtr7g108530 1.0kb upstream 1.0kb upstream 1000 false chr7: 44212646-44213645 Medicago truncatula
Medtr7g108530 1.0kb downstream 1.0kb downstream 2967 true chr7: 44209679-44212645 Medicago truncatula
Medtr7g108530 1.0kb downstream 1.0kb downstream 1000 false chr7: 44209679-44210678 Medicago truncatula
Medtr7g108530 2.0kb upstream 2.0kb upstream 3967 true chr7: 44210679-44214645 Medicago truncatula
Medtr7g108530 2.0kb upstream 2.0kb upstream 2000 false chr7: 44212646-44214645 Medicago truncatula
Medtr7g108530 2.0kb downstream 2.0kb downstream 3967 true chr7: 44208679-44212645 Medicago truncatula
Medtr7g108530 2.0kb downstream 2.0kb downstream 2000 false chr7: 44208679-44210678 Medicago truncatula
Medtr7g108530 5.0kb upstream 5.0kb upstream 6967 true chr7: 44210679-44217645 Medicago truncatula
Medtr7g108530 5.0kb upstream 5.0kb upstream 5000 false chr7: 44212646-44217645 Medicago truncatula
Medtr7g108530 5.0kb downstream 5.0kb downstream 6967 true chr7: 44205679-44212645 Medicago truncatula
Medtr7g108530 5.0kb downstream 5.0kb downstream 5000 false chr7: 44205679-44210678 Medicago truncatula
Medtr7g108530 10.0kb upstream 10.0kb upstream 11967 true chr7: 44210679-44222645 Medicago truncatula
Medtr7g108530 10.0kb upstream 10.0kb upstream 10000 false chr7: 44212646-44222645 Medicago truncatula
Medtr7g108530 10.0kb downstream 10.0kb downstream 11967 true chr7: 44200679-44212645 Medicago truncatula
Medtr7g108530 10.0kb downstream 10.0kb downstream 10000 false chr7: 44200679-44210678 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312397 5265 Fabidae View MSA
124074689 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.097       High
cufflinks 0.244        
cufflinks 0.459        
cufflinks 0.272        
cufflinks 1.124       High
cufflinks 0.124     Low Low
cufflinks 0.786        
cufflinks 0.539        
cufflinks 0.833        

0 Strain