Gene : Medtr7g109340 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24078//PTHR24078:SF257 - DNAJ HOMOLOG SUBFAMILY C MEMBER Description:  DnaJ heat shock family protein
Genomic Order:  5555 Name:  ? Medtr7g109340
Secondary Identifier:  ? PAC:31079502
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g109340 0.5kb upstream 0.5kb upstream 6393 true chr7: 44685628-44692020 Medicago truncatula
Medtr7g109340 0.5kb upstream 0.5kb upstream 500 false chr7: 44685628-44686127 Medicago truncatula
Medtr7g109340 0.5kb downstream 0.5kb downstream 6393 true chr7: 44686128-44692520 Medicago truncatula
Medtr7g109340 0.5kb downstream 0.5kb downstream 500 false chr7: 44692021-44692520 Medicago truncatula
Medtr7g109340 1.0kb upstream 1.0kb upstream 6893 true chr7: 44685128-44692020 Medicago truncatula
Medtr7g109340 1.0kb upstream 1.0kb upstream 1000 false chr7: 44685128-44686127 Medicago truncatula
Medtr7g109340 1.0kb downstream 1.0kb downstream 6893 true chr7: 44686128-44693020 Medicago truncatula
Medtr7g109340 1.0kb downstream 1.0kb downstream 1000 false chr7: 44692021-44693020 Medicago truncatula
Medtr7g109340 2.0kb upstream 2.0kb upstream 7893 true chr7: 44684128-44692020 Medicago truncatula
Medtr7g109340 2.0kb upstream 2.0kb upstream 2000 false chr7: 44684128-44686127 Medicago truncatula
Medtr7g109340 2.0kb downstream 2.0kb downstream 7893 true chr7: 44686128-44694020 Medicago truncatula
Medtr7g109340 2.0kb downstream 2.0kb downstream 2000 false chr7: 44692021-44694020 Medicago truncatula
Medtr7g109340 5.0kb upstream 5.0kb upstream 10893 true chr7: 44681128-44692020 Medicago truncatula
Medtr7g109340 5.0kb upstream 5.0kb upstream 5000 false chr7: 44681128-44686127 Medicago truncatula
Medtr7g109340 5.0kb downstream 5.0kb downstream 10893 true chr7: 44686128-44697020 Medicago truncatula
Medtr7g109340 5.0kb downstream 5.0kb downstream 5000 false chr7: 44692021-44697020 Medicago truncatula
Medtr7g109340 10.0kb upstream 10.0kb upstream 15893 true chr7: 44676128-44692020 Medicago truncatula
Medtr7g109340 10.0kb upstream 10.0kb upstream 10000 false chr7: 44676128-44686127 Medicago truncatula
Medtr7g109340 10.0kb downstream 10.0kb downstream 15893 true chr7: 44686128-44702020 Medicago truncatula
Medtr7g109340 10.0kb downstream 10.0kb downstream 10000 false chr7: 44692021-44702020 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307952 5265 Fabidae View MSA
124062750 5270 Rosid View MSA
123745045 5271 Pentapetalae View MSA
122792962 5272 Eudicot View MSA
122044951 5273 Angiosperm View MSA
121345005 5274 Embryophyte View MSA
123426286 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.493        
cufflinks 5.513        
cufflinks 3.167       Low
cufflinks 8.26        
cufflinks 5.848        
cufflinks 5.011        
cufflinks 8.676        
cufflinks 3.141       Low
cufflinks 12.083     High High

0 Strain