Gene : Medtr7g108940 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 Description:  RelA-SpoT-like protein RSH1
Genomic Order:  5535 Name:  ? Medtr7g108940
Secondary Identifier:  ? PAC:31078050
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g108940 0.5kb upstream 0.5kb upstream 10291 true chr7: 44530546-44540836 Medicago truncatula
Medtr7g108940 0.5kb upstream 0.5kb upstream 500 false chr7: 44530546-44531045 Medicago truncatula
Medtr7g108940 0.5kb downstream 0.5kb downstream 10291 true chr7: 44531046-44541336 Medicago truncatula
Medtr7g108940 0.5kb downstream 0.5kb downstream 500 false chr7: 44540837-44541336 Medicago truncatula
Medtr7g108940 1.0kb upstream 1.0kb upstream 10791 true chr7: 44530046-44540836 Medicago truncatula
Medtr7g108940 1.0kb upstream 1.0kb upstream 1000 false chr7: 44530046-44531045 Medicago truncatula
Medtr7g108940 1.0kb downstream 1.0kb downstream 10791 true chr7: 44531046-44541836 Medicago truncatula
Medtr7g108940 1.0kb downstream 1.0kb downstream 1000 false chr7: 44540837-44541836 Medicago truncatula
Medtr7g108940 2.0kb upstream 2.0kb upstream 11791 true chr7: 44529046-44540836 Medicago truncatula
Medtr7g108940 2.0kb upstream 2.0kb upstream 2000 false chr7: 44529046-44531045 Medicago truncatula
Medtr7g108940 2.0kb downstream 2.0kb downstream 11791 true chr7: 44531046-44542836 Medicago truncatula
Medtr7g108940 2.0kb downstream 2.0kb downstream 2000 false chr7: 44540837-44542836 Medicago truncatula
Medtr7g108940 5.0kb upstream 5.0kb upstream 14791 true chr7: 44526046-44540836 Medicago truncatula
Medtr7g108940 5.0kb upstream 5.0kb upstream 5000 false chr7: 44526046-44531045 Medicago truncatula
Medtr7g108940 5.0kb downstream 5.0kb downstream 14791 true chr7: 44531046-44545836 Medicago truncatula
Medtr7g108940 5.0kb downstream 5.0kb downstream 5000 false chr7: 44540837-44545836 Medicago truncatula
Medtr7g108940 10.0kb upstream 10.0kb upstream 19791 true chr7: 44521046-44540836 Medicago truncatula
Medtr7g108940 10.0kb upstream 10.0kb upstream 10000 false chr7: 44521046-44531045 Medicago truncatula
Medtr7g108940 10.0kb downstream 10.0kb downstream 19791 true chr7: 44531046-44550836 Medicago truncatula
Medtr7g108940 10.0kb downstream 10.0kb downstream 10000 false chr7: 44540837-44550836 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306868 5265 Fabidae View MSA
124066114 5270 Rosid View MSA
123750917 5271 Pentapetalae View MSA
122796089 5272 Eudicot View MSA
122044227 5273 Angiosperm View MSA
121348922 5274 Embryophyte View MSA
123424861 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.477        
cufflinks 1.853        
cufflinks 2.269        
cufflinks 0.222        
cufflinks 4.44       High
cufflinks 0.071     Low Low
cufflinks 0.349        
cufflinks 1.935        
cufflinks 0.202        

0 Strain