Gene : Medtr7g109610 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10381:SF12 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC Description:  ATP-dependent Clp protease proteolytic protein
Genomic Order:  5581 Name:  ? Medtr7g109610
Secondary Identifier:  ? PAC:31082199
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g109610 0.5kb upstream 0.5kb upstream 4739 true chr7: 44853379-44858117 Medicago truncatula
Medtr7g109610 0.5kb upstream 0.5kb upstream 500 false chr7: 44857618-44858117 Medicago truncatula
Medtr7g109610 0.5kb downstream 0.5kb downstream 4739 true chr7: 44852879-44857617 Medicago truncatula
Medtr7g109610 0.5kb downstream 0.5kb downstream 500 false chr7: 44852879-44853378 Medicago truncatula
Medtr7g109610 1.0kb upstream 1.0kb upstream 5239 true chr7: 44853379-44858617 Medicago truncatula
Medtr7g109610 1.0kb upstream 1.0kb upstream 1000 false chr7: 44857618-44858617 Medicago truncatula
Medtr7g109610 1.0kb downstream 1.0kb downstream 5239 true chr7: 44852379-44857617 Medicago truncatula
Medtr7g109610 1.0kb downstream 1.0kb downstream 1000 false chr7: 44852379-44853378 Medicago truncatula
Medtr7g109610 2.0kb upstream 2.0kb upstream 6239 true chr7: 44853379-44859617 Medicago truncatula
Medtr7g109610 2.0kb upstream 2.0kb upstream 2000 false chr7: 44857618-44859617 Medicago truncatula
Medtr7g109610 2.0kb downstream 2.0kb downstream 6239 true chr7: 44851379-44857617 Medicago truncatula
Medtr7g109610 2.0kb downstream 2.0kb downstream 2000 false chr7: 44851379-44853378 Medicago truncatula
Medtr7g109610 5.0kb upstream 5.0kb upstream 9239 true chr7: 44853379-44862617 Medicago truncatula
Medtr7g109610 5.0kb upstream 5.0kb upstream 5000 false chr7: 44857618-44862617 Medicago truncatula
Medtr7g109610 5.0kb downstream 5.0kb downstream 9239 true chr7: 44848379-44857617 Medicago truncatula
Medtr7g109610 5.0kb downstream 5.0kb downstream 5000 false chr7: 44848379-44853378 Medicago truncatula
Medtr7g109610 10.0kb upstream 10.0kb upstream 14239 true chr7: 44853379-44867617 Medicago truncatula
Medtr7g109610 10.0kb upstream 10.0kb upstream 10000 false chr7: 44857618-44867617 Medicago truncatula
Medtr7g109610 10.0kb downstream 10.0kb downstream 14239 true chr7: 44843379-44857617 Medicago truncatula
Medtr7g109610 10.0kb downstream 10.0kb downstream 10000 false chr7: 44843379-44853378 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296193 5265 Fabidae View MSA
124041507 5270 Rosid View MSA
123746339 5271 Pentapetalae View MSA
122771871 5272 Eudicot View MSA
122043333 5273 Angiosperm View MSA
121344238 5274 Embryophyte View MSA
123424888 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.304        
cufflinks 9.347        
cufflinks 8.835        
cufflinks 1.545        
cufflinks 9.981       High
cufflinks 0.294       Low
cufflinks 1.163        
cufflinks 8.013        
cufflinks 1.726        

0 Strain