Gene : Medtr7g109640 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF00628//PF13508//PF16135 - PHD-finger (PHD) // Acetyltransferase (GNAT) domain (Acetyltransf_7) // TPL-binding domain in jasmonate signalling (Jas) Description:  RING/FYVE/PHD zinc finger protein
Genomic Order:  5582 Name:  ? Medtr7g109640
Secondary Identifier:  ? PAC:31077919
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g109640 0.5kb upstream 0.5kb upstream 2891 true chr7: 44870216-44873106 Medicago truncatula
Medtr7g109640 0.5kb upstream 0.5kb upstream 500 false chr7: 44872607-44873106 Medicago truncatula
Medtr7g109640 0.5kb downstream 0.5kb downstream 2891 true chr7: 44869716-44872606 Medicago truncatula
Medtr7g109640 0.5kb downstream 0.5kb downstream 500 false chr7: 44869716-44870215 Medicago truncatula
Medtr7g109640 1.0kb upstream 1.0kb upstream 3391 true chr7: 44870216-44873606 Medicago truncatula
Medtr7g109640 1.0kb upstream 1.0kb upstream 1000 false chr7: 44872607-44873606 Medicago truncatula
Medtr7g109640 1.0kb downstream 1.0kb downstream 3391 true chr7: 44869216-44872606 Medicago truncatula
Medtr7g109640 1.0kb downstream 1.0kb downstream 1000 false chr7: 44869216-44870215 Medicago truncatula
Medtr7g109640 2.0kb upstream 2.0kb upstream 4391 true chr7: 44870216-44874606 Medicago truncatula
Medtr7g109640 2.0kb upstream 2.0kb upstream 2000 false chr7: 44872607-44874606 Medicago truncatula
Medtr7g109640 2.0kb downstream 2.0kb downstream 4391 true chr7: 44868216-44872606 Medicago truncatula
Medtr7g109640 2.0kb downstream 2.0kb downstream 2000 false chr7: 44868216-44870215 Medicago truncatula
Medtr7g109640 5.0kb upstream 5.0kb upstream 7391 true chr7: 44870216-44877606 Medicago truncatula
Medtr7g109640 5.0kb upstream 5.0kb upstream 5000 false chr7: 44872607-44877606 Medicago truncatula
Medtr7g109640 5.0kb downstream 5.0kb downstream 7391 true chr7: 44865216-44872606 Medicago truncatula
Medtr7g109640 5.0kb downstream 5.0kb downstream 5000 false chr7: 44865216-44870215 Medicago truncatula
Medtr7g109640 10.0kb upstream 10.0kb upstream 12391 true chr7: 44870216-44882606 Medicago truncatula
Medtr7g109640 10.0kb upstream 10.0kb upstream 10000 false chr7: 44872607-44882606 Medicago truncatula
Medtr7g109640 10.0kb downstream 10.0kb downstream 12391 true chr7: 44860216-44872606 Medicago truncatula
Medtr7g109640 10.0kb downstream 10.0kb downstream 10000 false chr7: 44860216-44870215 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314856 5265 Fabidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low Low
cufflinks 0.005     Low Low
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.014     Low  
cufflinks 0.025     Low  

0 Strain