Gene : Medtr7g109470 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6 Description:  DNA mismatch repair MSH3-like protein
Genomic Order:  5567 Name:  ? Medtr7g109470
Secondary Identifier:  ? PAC:31077754
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g109470 0.5kb upstream 0.5kb upstream 8522 true chr7: 44759016-44767537 Medicago truncatula
Medtr7g109470 0.5kb upstream 0.5kb upstream 500 false chr7: 44767038-44767537 Medicago truncatula
Medtr7g109470 0.5kb downstream 0.5kb downstream 8522 true chr7: 44758516-44767037 Medicago truncatula
Medtr7g109470 0.5kb downstream 0.5kb downstream 500 false chr7: 44758516-44759015 Medicago truncatula
Medtr7g109470 1.0kb upstream 1.0kb upstream 9022 true chr7: 44759016-44768037 Medicago truncatula
Medtr7g109470 1.0kb upstream 1.0kb upstream 1000 false chr7: 44767038-44768037 Medicago truncatula
Medtr7g109470 1.0kb downstream 1.0kb downstream 9022 true chr7: 44758016-44767037 Medicago truncatula
Medtr7g109470 1.0kb downstream 1.0kb downstream 1000 false chr7: 44758016-44759015 Medicago truncatula
Medtr7g109470 2.0kb upstream 2.0kb upstream 10022 true chr7: 44759016-44769037 Medicago truncatula
Medtr7g109470 2.0kb upstream 2.0kb upstream 2000 false chr7: 44767038-44769037 Medicago truncatula
Medtr7g109470 2.0kb downstream 2.0kb downstream 10022 true chr7: 44757016-44767037 Medicago truncatula
Medtr7g109470 2.0kb downstream 2.0kb downstream 2000 false chr7: 44757016-44759015 Medicago truncatula
Medtr7g109470 5.0kb upstream 5.0kb upstream 13022 true chr7: 44759016-44772037 Medicago truncatula
Medtr7g109470 5.0kb upstream 5.0kb upstream 5000 false chr7: 44767038-44772037 Medicago truncatula
Medtr7g109470 5.0kb downstream 5.0kb downstream 13022 true chr7: 44754016-44767037 Medicago truncatula
Medtr7g109470 5.0kb downstream 5.0kb downstream 5000 false chr7: 44754016-44759015 Medicago truncatula
Medtr7g109470 10.0kb upstream 10.0kb upstream 18022 true chr7: 44759016-44777037 Medicago truncatula
Medtr7g109470 10.0kb upstream 10.0kb upstream 10000 false chr7: 44767038-44777037 Medicago truncatula
Medtr7g109470 10.0kb downstream 10.0kb downstream 18022 true chr7: 44749016-44767037 Medicago truncatula
Medtr7g109470 10.0kb downstream 10.0kb downstream 10000 false chr7: 44749016-44759015 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300035 5265 Fabidae View MSA
124062676 5270 Rosid View MSA
123736808 5271 Pentapetalae View MSA
122787445 5272 Eudicot View MSA
122041770 5273 Angiosperm View MSA
121347464 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.41        
cufflinks 0.389        
cufflinks 0.43        
cufflinks 0.05     Low Low
cufflinks 1.02       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.301        
cufflinks 0.363        
cufflinks 0.451        

0 Strain